Prunus mume (Japanese apricot): 103339574
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Entry
103339574 CDS
T03196
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00906
Carotenoid biosynthesis
pmum01100
Metabolic pathways
pmum01110
Biosynthesis of secondary metabolites
Module
pmum_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
103339574
Enzymes [BR:
pmum01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
103339574
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
Thi4
Pyr_redox_2
GDI
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
103339574
NCBI-ProteinID:
XP_008241118
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Position
LG8:complement(7588503..7594606)
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AA seq
715 aa
AA seq
DB search
MSLPHSLSMPELGFTSSPSPASMHISQFPSHHHCSTQLGTSRPRIQEHRFQLILSQHGSQ
GNGHNLCELKLGSQNSQLLGHGYSVQLGTIRPRSQKHRKLSFGHGRTSFLSDYKLSGLNL
GFYKTRDLDTLRPKVPKSKLIQGCHLGGSNFSKCRHGSVQLGLSEVNSRNLNFVMRSSST
LSVDKVVEREGGGGKSYYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYE
RDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMQVIPDPTTVHYHLPNNLSVLVHRE
YSEFITELTGKFPHEKEGILKFYGECWKIFNALNSLELKSLEEPIYLFGQFFQKPLECLT
LAYYLPQNAGDIARKYIQDPQLLSFIDAECFIVSTVKALQTPMINASMVMCDRHYGGINY
PVGGVGGIAKSLAKGLVDQGSEILYKANVTSIIVDQGRAVGVRLSDGREFFAKTIISNAT
RWNTFGTLLKGDDVPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWTR
LEEPYGSIFLSIPTVLDPSLAPEGRHILHIFTTSSIEDWEGLSRKDYEAKKEIVADEIIG
RLEDKLFPGLKSSIVFKEVGTPKTHRRYLARDKGTYGPIPRRTPKGLLGMPFNTTAIEGL
YCVGDSCFPGQGVIAVSFSGVMCAHRVAADIGLEKKSPVLDAALLRLLGWLRTLA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgccccactcactttccatgcctgagcttggatttacttcttccccttcccct
gcttccatgcacatttctcagtttcccagtcaccaccactgcagcacccaattgggtact
tcaagacccagaattcaagagcacaggtttcagcttattcttagccagcatggctctcag
ggcaatggtcataatctctgtgaattgaaattggggtctcagaattctcagctccttggt
catggatatagtgtgcagttgggtacaatcagacccagaagccaaaaacatagaaaactc
tcttttgggcatggtagaacctcatttctcagtgattacaagctcagtggattgaattta
gggttttataagaccagagacctggacactctgagacccaaagttcccaaaagcaaattg
attcaagggtgtcatttgggaggttcaaatttcagtaaatgcagacatggtagtgtgcaa
ttagggttgtctgaggtgaattccaggaatttgaactttgtgatgaggtcaagttcaaca
ttgagtgtagataaagtggtggagagagagggaggtggtggtaagagctactatgacgcc
attgttatagggtcaggaattggagggttggttgcagctacccagttggctgtgaagggt
gccagggttttagtgttagagaagtatgtgattcctggtgggagctctgggtattatgag
agagatggttatacttttgatgttggatcttctgtgatgttcggtttcagcgataagggc
aatctaaatttgataacccaagcattggcagcagtgggttgtgagatgcaggtgatacct
gatccgactactgtccattatcatctccccaataatctttctgtcctagtgcacagagaa
tacagtgaatttatcacagaacttactggtaaatttccccatgaaaaggaagggattctc
aaattctatggtgaatgttggaagattttcaatgccttgaactcattggaactgaagtca
cttgaggagccaatctacctttttggacagttctttcagaagcctcttgaatgcttgaca
cttgcctactatttgcctcaaaatgctggggacatagctcgtaaatacattcaggatccc
cagctgttgtctttcatagatgcggagtgttttattgtgagtacagtcaaggctttgcag
acaccaatgatcaatgcaagcatggtaatgtgtgacaggcattatggtgggattaactac
cctgttggtggtgttggcggaattgcaaagtccttagcaaaaggtctagtagaccagggc
agtgagatactttacaaggccaatgttactagcatcatagttgatcagggcagagctgtt
ggagtaaggctttcagatgggagggaattctttgccaaaaccataatatcaaatgctact
agatggaatacctttggaacactgctaaaaggagacgatgttccaaaagaagaggaaaat
tttcagaaagtttatgttaaggccccatcttttctttccattcacatgggggtgaaagct
gaagttctgccaccagatacggattgccaccattttgtgcttgaggatgattggacaagg
ttagaagagccttatggaagtatctttttaagcattccaactgtccttgacccatcgttg
gctccagaaggacgccacatacttcacatatttacaacctcttccatagaggactgggag
ggactctctcgaaaggactacgaagcaaagaaagagattgtagcagatgaaatcattggc
agattagaggataaactatttccagggctaaaatcatccatcgtttttaaggaggtggga
acaccaaagacacacaggcggtacctggctcgtgacaagggtacttatggaccaatacca
cgtagaactcctaagggcttattgggaatgccattcaatacaacagccatagagggtctt
tactgtgttggtgatagctgctttccgggacaaggagttatagctgtatccttctcagga
gtaatgtgtgctcatcgagtagctgctgatatagggcttgagaagaagtccccagtattg
gatgctgccctccttcgacttcttggatggttaaggacattagcatga
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