Prunus mume (Japanese apricot): 103339603 Help Entry 103339603         CDS       T03196                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism pmum  Prunus mume (Japanese apricot) Pathway pmum03040   Spliceosome Brite KEGG Orthology (KO) [BR:pmum00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     103339603  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pmum03021]     103339603    03041 Spliceosome [BR:pmum03041]     103339603    03036 Chromosome and associated proteins [BR:pmum03036]     103339603 Transcription machinery [BR:pmum03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      103339603 Spliceosome [BR:pmum03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     103339603  Complex B     103339603  Complex C    U2 SnRNP specific factors     103339603 Chromosome and associated proteins [BR:pmum03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      103339603     TFTC complex      103339603 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  103339603 NCBI-ProteinID:  XP_008241148 LinkDB All DBs Position LG8:7876695..7887731 Genome browser AA seq 1355 aa AA seqDB search MAVSEEECSSAKSRSSSSASSSSSHYLAKCVLRGSVVLQVLYGHIRFPTSYDVVFGKETS IELVIIGEDGIVQSICEQPVFGTIKDIAILPSNDKFRTQNPQMLGKDLLVVISDSGNLSF LSFCNEMHRFFPVTQVQLSNPGNSRNQLGRMLAIDSSGCFIAASAYENQLAMFSVSVSGG SDIIDKKIVFPPEKEADASAARVQKDSICGTIWSMSFISKDPSQSSKGHNPVLAVLLNRR GAVLNELLLLGWNISEQEIYVISTYTEDGPLAHSIVEVPHSYGFAFMFREGDALLMDLRD AQIPYCVHKTSPNFLSNVVDEANFVQESSRGCDLSRVLQVDDEGGLFNVAACALLELSDL DPMCIDGDKYNVNVTYKHVCSWSWEPGNAKNPRMIICADTGEYFMIEIIFGPDGLKVQES ECLYKGLPCKAVLWVEGGFLAAIVEMGDGMVLKMENGALLYASPIQNIAPVLDMSVVDYH DEKHDQMFACCGVAPEGSLRIIRNGISVEKLLRTAPIYQGITGTWTLRMKVIDSYHSFLV LSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLASGVVNDGLLIQIHKSAVRLCLPTKAAH SEGIPLPSPVCTSWFPENMSISLGAVGHNLIVVSSSNPCFLFILGVRLLSAHHYEIYEMQ HLRLQNELSCVSIPQKCFEGTSLVDNSCAATLPFGVDISNIFVIGTHKPSVEVLSLVPNE GLRVLASGTISLTNTLGTAISGCIPQDVRLVLVDRLYVLSGLRNGMLLRFEWPASPTMPK IYDVKFSEKTKDKFPIELQLIATRRIGITPVFLVPLSDSLDGDIVVLSDRPWLLHTARHS LSYTSISFQSSTHVTPVCYVECPKGILFVAENCLHLVEMVHSKRLNVQKFHLGGTPREVL YHSESRLLLVMRTDLSNDTSSSDICCVDPLSGSVLSSFKLEPGETGKSMELVRVGNEQVL VVGTSLSSGPAIMPSGEAESTKGRLIVLCLEHVQNSDSGSMTLCSKAGSSSQRASPFHEI VGYATEQLSSSSLCSSPDDTSCDGIKLEETEAWQFRLAYVTKWPGMVLAICPYLDRYFLA SSGNAFYVCGFPNDNSQRVRKFAWARTRFMITSLTAHFTTIAVGDCRDGVLFYAYHEDSK KLQQLYFDPCQRLVADCILMDVNTAVVSDRKGSIAVLSCADYLEDTASPECNLTVSCAYY MGEIAMSIRKGSFSYKLPADDVLKGSDGNIDFSQNAIIVSTLLGSIITFVPISREEYELL EAVQDRLVVHPLTAPILGNDHNEYRSRENPVGVPKILDGDMLSQFLELTGMQQEAVLSSP LGAQGTVKPGLKSRYALIPVNQVVQLLERVHYALN NT seq 4068 nt NT seq  +upstreamnt  +downstreamnt atggcggtctcagaggaagagtgttcgtctgcaaagtcccgatcatcgtcatcagcctcc tccagcagctctcactacctcgccaagtgcgtcctccgagggagcgttgttcttcaggtt ctctatggtcacatccgctttcccacttcctacgacgtcgtcttcgggaaggagacttcc atagagttggtcataattggtgaagatgggattgtacagtctatatgtgagcagcctgtg tttggtaccattaaagacattgccatcctaccctcgaatgacaaattccgcacccaaaac ccacagatgctgggtaaagaccttttggttgttatttctgattctgggaacctctcattt ctctctttttgcaatgaaatgcacaggttttttcctgtgacacaagttcaactttctaat cctggaaattcaaggaatcagcttggaagaatgctagccattgattcaagtggctgtttc attgctgctagtgcttatgaaaaccagttggctatgttctctgtttcagtgtctggaggc agtgacattattgataagaaaatagtcttcccccccgaaaaagaagcagatgctagtgct gccagagttcaaaaagacagtatatgtggtactatatggagcatgagctttatttcaaag gatcctagtcaatcaagtaaggggcataatcctgtacttgccgttcttctaaataggagg ggggcagtccttaatgaattgctgttactgggatggaatattagtgaacaggaaatttat gtgatttctacgtatactgaagatggaccgttagcacatagtattgttgaagttcctcat tcttatggatttgcttttatgtttagggagggtgatgctctcctaatggatcttagagat gcacagatcccctattgtgtccacaaaacaagcccaaatttcttatccaatgtggttgat gaggcaaattttgttcaagagtcatctagaggatgtgatctatctagagtacttcaggtt gatgatgaaggaggtttatttaatgtagctgcatgtgctttactagaactaagcgattta gatccaatgtgtatagatggtgacaaatacaatgtgaatgtgacttacaaacatgtgtgt tcatggagttgggaaccgggaaatgctaaaaatcccagaatgatcatttgtgcagataca ggagaatatttcatgattgaaattatctttggtcctgatggacttaaggttcaagaatct gagtgtctttacaaaggtttaccctgcaaggcagttttgtgggttgaaggcgggtttctg gctgcaatagtagagatgggagacgggatggtattgaaaatggaaaatggggcacttctt tatgcaagtcctattcaaaatattgccccagtattggatatgtcagttgtggattaccat gatgaaaaacatgatcaaatgtttgcctgttgtggagtggcaccggaggggtcactaagg attattaggaatggtataagtgtggaaaagctactgaggactgcacctatatatcaaggg attactggtacttggacattacgaatgaaagtaattgattcttaccattcttttcttgtg ctatcatttgttgaggagaccagagtattatcagttggtttaagctttactgatgtgacg gattcagttggttttcagcctgacgtttctactttggcctccggtgttgtaaatgatgga ttgctgattcagattcacaaaagtgcagttaggctctgtttacccaccaaggctgcccac tctgaaggtattccactgccttctccggtttgcacatcttggttcccagaaaatatgagt atcagtttgggggctgttggacataatctaattgttgtttcttcgtctaatccatgcttt ttattcattcttggggttagattgctttcggcgcatcattatgaaatatatgaaatgcaa catttgagattgcaaaatgaattatcgtgtgtttccattcctcagaaatgttttgaggga accagtctggtggataatagctgtgctgccacccttccatttggagttgacatcagtaat atctttgttattggcacgcacaagccttcagtggaagttttgtctcttgtgcctaatgaa ggactgagagttcttgcttctgggacgatctcgttaacaaatactttgggaactgctatt agtggctgcattcctcaagatgtaaggcttgtattagtggaccgattgtatgtcctttcg ggattgaggaatggaatgctgcttcgttttgaatggcctgcttcaccaacaatgcctaaa atatatgatgttaagttctctgagaagacaaaagacaaatttcctattgaacttcagttg attgctacacgtcggattggcatcacccctgttttcttggttcctttgagtgactcgcta gatggtgatatagttgttctcagtgataggccttggttgttgcatactgcaaggcacagc ctctcatatacttctatctcatttcaatcttcgacgcatgtcactcctgtatgttatgtg gaatgccctaagggaattttatttgttgcagaaaactgtctacatttggtagagatggtg catagtaagaggcttaatgtgcagaagtttcatcttggaggcactccgagggaggtcctt tatcatagtgaaagcaggctattgcttgtgatgaggactgatttgagtaatgatacatct tcatccgatatatgctgtgtagatcctcttagtgggtcagtgctgtcatctttcaaactt gaacccggtgaaacagggaaatccatggagttagtgagggttggaaatgaacaggttctt gtggttgggacgagtttatcttctggtccagccataatgcctagtggtgaggctgagagt accaagggacgtcttattgttctctgtcttgaacatgtgcaaaattcagacagtggctca atgacattatgctcaaaggcagggtcatcttctcaacgtgcatctccatttcatgaaatt gttgggtatgccacagaacagctttcaagcagtagtctttgcagtagcccagatgatacg agctgtgatggaattaaacttgaagaaactgaagcatggcagtttcgattggcttatgta accaaatggcctgggatggtgcttgcaatctgtccttatcttgatcgttacttcttggcg tcttctggtaatgctttttatgtatgcgggtttccaaatgacaattcccaaagagtgaga aagtttgcttgggcaaggacacgttttatgattacgtctttgactgcacatttcactaca attgctgttggtgattgtcgtgatggtgttcttttctatgcttatcatgaggattccaaa aagctgcagcaactgtactttgatccatgtcagagattagttgctgattgcattcttatg gatgtcaatactgctgttgtttcagatcgtaagggaagcattgctgttctttcttgtgca gattatttagaagataccgcaagtccagaatgtaatttaacagtgagctgtgcttattat atgggcgagatagctatgagcatcaggaagggatcattttcatataaactcccagctgat gatgtattgaagggtagtgatggaaatatcgacttctctcaaaacgccatcattgtgagt acactgcttggaagcataataaccttcgtgccaatatcaagggaagaatatgaactctta gaagctgtccaagatagactagtggtgcatccattaactgctcctattcttgggaatgat cataatgagtatcgtagtcgtgaaaatccggtaggagtacctaagatacttgatggtgac atgctctctcaattcttggagctgactggtatgcaacaagaggcagtattatcatcacct cttggggcacaaggcactgtaaagcccggtttgaaatcgcgatatgcgctaatccctgtt aatcaggttgtgcaactccttgagcgggttcactatgccctaaactaa

DBGET integrated database retrieval system