Prunus mume (Japanese apricot): 103339635
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Entry
103339635 CDS
T03196
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
pmum04141
Protein processing in endoplasmic reticulum
pmum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103339635
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103339635
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103339635
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103339635
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103339635
03009 Ribosome biogenesis [BR:
pmum03009
]
103339635
03110 Chaperones and folding catalysts [BR:
pmum03110
]
103339635
04131 Membrane trafficking [BR:
pmum04131
]
103339635
03051 Proteasome [BR:
pmum03051
]
103339635
03029 Mitochondrial biogenesis [BR:
pmum03029
]
103339635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103339635
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
103339635
Spliceosome [BR:
pmum03041
]
Complex B
Other components
Prp19 complex
103339635
Complex C
Prp19-CDC5 complex
103339635
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103339635
Chaperones and folding catalysts [BR:
pmum03110
]
Heat shock proteins
HSP70 / DNAK
103339635
Membrane trafficking [BR:
pmum04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
103339635
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
103339635
Proteasome [BR:
pmum03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
103339635
Mitochondrial biogenesis [BR:
pmum03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
103339635
Exosome [BR:
pmum04147
]
Exosomal proteins
Proteins found in most exosomes
103339635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
103339635
NCBI-ProteinID:
XP_008241192
LinkDB
All DBs
Position
LG1:complement(21193576..21196847)
Genome browser
AA seq
647 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKVTPGPGDKPMIGVSYKGEEKVFAA
EEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSQGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTIKDEKIGAKLPPADKKKIEDSIETAIQWLDSNQLAEADEFED
KMKELESICNPIIAKMYQGAGADGAGPVDDEAPAGASGPGPKIEEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaaggagagggaccagccatcggtatcgatctcggcaccacctactcctgc
gttggtgtatggcaacacgaccgtgttgagatcatcgccaatgaccagggtaacagaacg
acgccgtcatatgtcgcattcacagacaccgagcgtttgatcggtgatgctgctaagaac
caggtcgccatgaaccccattaacaccgtattcgatgctaagaggttgattggtcgtaga
ttttctgatgcgtctgtccagagtgacatgaaattgtggccattcaaggtcacccccgga
cctggtgacaagcccatgatcggtgtctcttacaagggagaagaaaaggtcttcgccgct
gaggagatctcctccatggtccttatcaagatgcgtgagattgctgaggcttacctaggc
agcacaatcaagaacgccgtggtcacagtccctgcctacttcaacgactctcagagacag
gccaccaaggatgccggtgtcattgctggaatcaatgtcctccgtatcatcaacgagccc
acagcagctgcaattgcctatggtcttgacaagaaggccaccagcgttggtgagaagaat
gtcttgatttttgaccttggaggcggtacttttgatgtgtcacttctcacaattgaggag
ggtatctttgaggtcaaggccacagccggagacacccatttgggaggtgaagattttgac
aacagaatggtgaaccactttgttcaggagttcaagaggaagaacaagaaggacatcagc
ggcaacccaagagccctcaggaggttgaggacttcatgtgaaagggcgaagagaaccctc
tcatccactgcccaaaccaccattgaaattgactctttgtatgagggtattgatttctac
tccaccatcacccgtgccagattcgaggagctcaacatggaccttttcagaaagtgtatg
gagcccgtcgagaagtgtttgagagatgccaagatggacaagagcacggtccatgatgtc
gtgcttgttggtggatcaaccagaattcccaaggtgcagcagcttcttcaggacttcttc
aacggcaaggagctttgcaagagcatcaaccccgatgaggctgtcgcctacggtgccgca
gtccaggctgccattcttagcggtgagggaaacgagaaggtccaggaccttcttctattg
gatgtcaccccactatctcaaggtttggaaactgccggaggtgtcatgaccgttttgatc
cccagaaacacaaccatccccaccaagaaggaacaggtcttctcaacatactccgacaac
cagcccggtgtgttgatccaggtctatgaaggggaaagaaccaggaccagggacaacaac
ttgctcggaaaattcgagctctccggcatcccacctgctcccagaggcgttccccaaatc
actgtttgcttcgacatcgatgccaacggtattttgaacgtgtcggccgaggacaagact
accggacagaagaacaagatcacaatcaccaacgacaagggcaggctctcaaaggaggac
attgagaagatggtccaggaggcagagaagtacaagtctgaggatgaagagcacaagaag
aaggttgaggcaaagaacgccttggagaactatgcgtacaacatgaggaacaccatcaag
gacgagaagatcggagccaagttgccgccagctgacaagaagaagatcgaagactcgatc
gaaaccgccatccagtggctcgacagcaaccagctcgcagaggccgatgagttcgaagac
aagatgaaggagttggagagcatctgcaacccaatcatcgccaagatgtaccagggtgct
ggtgctgacggtgctggccctgttgatgatgaagctccagctggtgcaagcggccctgga
cccaagattgaggaagtcgactaa
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