KEGG   Prunus mume (Japanese apricot): 103339741
Entry
103339741         CDS       T03196                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103339741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103339741
Spliceosome [BR:pmum03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103339741
 Complex B
    103339741
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 103339741
NCBI-ProteinID: XP_008241308
LinkDB
Position
LG8:complement(8728458..8731486)
AA seq 329 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTN
PGVDPQGQALDPRKIQDNFEDFYEDLFEELSKYGQIESLNICDNLADHMVGNVYVQFREE
EHAQAALQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE
LRRRLFGRNRRRHSRSRSRSRSPQRHHRGGYQERPHGGRGFGRRGGGDDDRDHRFHDKAR
RPRSRSPGRRGRSRSPVGTGGKRNRSPPARESSAERRAKIEQWNREREQVDSGSKYDNNN
NNNNNDDEWNGYAENSDQYYEDPQQQQQQ
NT seq 990 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcatccatcttcggcacagagaaggaccgtgtcaactgtcccttc
tacttcaagatcggtgcttgcaggcatggcgaccgatgctctcgcctccacaccaagccc
agcatcagccccacccttctgctttccaacatgtaccagcggcccgatatgctcaccaac
cccggcgtcgacccccagggccaagccttagaccctcgaaagatccaagacaacttcgag
gatttttatgaggatctgtttgaggagctgagcaagtatggacagatcgagagcttgaat
atctgtgataatttggctgaccacatggttggtaatgtgtacgttcagttcagggaggaa
gaacatgctcaagctgcgcttcagaatctcactgggaggttctatgcagggcgccccatc
atcgttgacttttccccggtgacggattttcgtgaagctacatgtaggcagtatgaagaa
aatgtatgcaatcgaggtggctattgcaacttcatgcatttgaagaaaattagcagggag
ttgaggaggcgattatttgggagaaacaggagaaggcatagtcgcagtcgaagcagaagc
cgtagtcctcaaaggcatcatcgtggtggttatcaggagcgaccacatggaggtcgcggt
tttggcagaagaggaggaggagatgatgacagagatcatcgtttccatgataaagcaagg
aggcctagaagccgtagtcccggacgtagaggaagaagtagaagccctgtgggcactggg
gggaaaaggaataggagtcctccagccagggaaagcagtgctgaaagaagggctaagatc
gagcaatggaacagggaacgggaacaggtggactccggaagtaagtatgataataacaac
aacaataacaataatgatgatgaatggaatggttacgctgagaacagcgatcagtactac
gaagatcctcagcagcagcagcagcagtag

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