Prunus mume (Japanese apricot): 103339773
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Entry
103339773 CDS
T03196
Name
(RefSeq) polyadenylate-binding protein 7 isoform X2
KO
K13126
polyadenylate-binding protein
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
pmum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103339773
09123 Folding, sorting and degradation
03018 RNA degradation
103339773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103339773
03041 Spliceosome [BR:
pmum03041
]
103339773
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103339773
mRNA cycle factors
Stress granule specific factors
103339773
Spliceosome [BR:
pmum03041
]
Complex C
Other components
Complex C specific factors
103339773
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
Nup35_RRM_2
RRM_MUD2_C
RRM_ACIN1
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
103339773
NCBI-ProteinID:
XP_008241342
UniProt:
A0ABM0PLI1
LinkDB
All DBs
Position
LG8:complement(8961544..8965851)
Genome browser
AA seq
632 aa
AA seq
DB search
MAVNPLAVGVPTASLYVGDLNPYITDGQLYDAFSQFKSITSVRVCRDSTDGHSLCYGYIN
FINPQEAIQAIEVKNNSEVHGKVIRVMWSHRDPDARRSGIGNVFVKNLSESIDNVGLQDM
FKKFGNILSCKVATFDDGKSKGYGFVQFESEESAIAAIENLNGSTVGDKPLYVAKFIRKS
DRVLANPDMKYTNLYMKNLDTNVREELVEEKFSEFGKIVSFTITKDDNGNSRGFGFVNFE
NPDDARQAMEAMNGSQLGSKVLYVARAQKKAEREQMLRRQFEEKRKEQMVKFKGSNVYVK
NIDDDVTDEELVEHFSQCGTITSAKIMRDEKGISKGFGFVCFSTPEEGNKAVNTFHGYMF
HRKPLYVAIAQRKEERQAQLQLQYAQRMAGLAGPSTAVIPGGYPPIYYQAPSGVVPQVPP
RPGLMYQPLGLRPGWRANGFAPTSGPAYQPPPVSVMPRQHRQNRGRMNGHMLPQGSAYMP
HLQQSTQLSHSAKDSNNQQGTGQAKYVPNGRQRDMNKGSGVSTNASNSVGGGSQGPEMLS
SMLAAAAPEQQKQILGEHLYPLVHKHKPDLASKITGMLLEMDNSELLLLLESPDSLAAKV
GEAVQVLKISKTKVSNKDAIHPSFLSAEVAVN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggccgttaatcctctggcggtgggtgtgccgactgcgtcgctgtacgtcggagacctt
aatccgtacatcaccgatggtcagctgtacgatgctttcagtcagttcaagtccatcacg
tccgtacgggtctgtagggactccaccgacggccattctctctgctacggctacatcaac
ttcatcaacccgcaagaagcaattcaagctattgaggtgaagaataactctgaggtgcat
ggaaaggtgataagggtcatgtggtcgcatcgtgatcctgatgcgagaagaagtggaatt
gggaatgtgtttgtcaagaacttgagcgaatcgattgataatgtagggcttcaagatatg
tttaagaaatttggaaatatattgtcttgcaaagtcgccacgtttgatgatgggaagagt
aaaggctatggctttgttcagtttgagtctgaggaatctgcaattgctgctattgagaac
ctaaatggctccactgtgggagacaaacctctgtatgttgccaaatttattagaaagagc
gatcgagttttggccaatcctgatatgaaatatacaaatttgtacatgaagaatttggat
acaaatgtcagggaagagcttgtggaggaaaagttctccgaattcgggaaaattgttagc
ttcactattacaaaggatgacaatgggaactctagaggttttggatttgtgaactttgag
aacccagatgatgctcgacaagcaatggaggcaatgaatggatcacaactgggctccaag
gttctgtatgtagcaagggcacagaagaaggcagagcgtgagcaaatgttgcgtcggcaa
tttgaggagaaacgaaaggagcaaatggtgaaattcaagggatcaaatgtgtatgtgaag
aacattgatgatgatgtcactgatgaagagctggtagaacacttcagtcagtgtggcaca
attacttctgcaaagattatgcgagatgagaaaggaataagcaaagggtttggttttgtt
tgcttctctacccctgaggagggcaataaggctgtgaatacttttcatggatatatgttt
catcggaagccattgtatgtggctattgctcaaaggaaagaggaaagacaagcacagctg
cagcttcaatatgcacagcgtatggcaggacttgctggtccttcaacagcagtcatccct
ggtggataccctcctatctattatcaagctccctctggtgttgttccacaagtacctcct
cgtccgggactgatgtatcagcctttgggattgaggccaggatggagagccaacggcttt
gcacctacatctgggccagcctatcaaccaccaccggtttctgttatgccaagacaacat
aggcaaaacaggggaagaatgaacgggcatatgcttcctcagggaagtgcatatatgcca
catttacaacagtccactcagctgtcacactcagcaaaagattcaaacaatcagcagggg
acggggcaggctaagtatgttcctaatggtcgccaacgcgacatgaataaaggatcagga
gtctcaactaatgcttccaattctgttggaggtgggtctcaaggaccagagatgctgagt
agcatgcttgctgctgctgctcctgagcagcagaaacagatacttggcgagcatctctac
ccactcgtccataaacataagcccgaccttgcctcaaaaattacagggatgctgctggag
atggacaactcagaactgctgcttttattggagtcaccagattctttggctgccaaagtg
ggagaagctgttcaggtgctcaaaatctccaagactaaagtgtctaacaaagatgccatt
catcctagttttctctctgctgaggttgcggtcaactga
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integrated database retrieval system
