Prunus mume (Japanese apricot): 103339901
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Entry
103339901 CDS
T03196
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103339901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103339901
Enzymes [BR:
pmum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103339901
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
103339901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DNA_pol_B_exo2
TAF4
Motif
Other DBs
NCBI-GeneID:
103339901
NCBI-ProteinID:
XP_008241474
LinkDB
All DBs
Position
LG8:9582615..9593592
Genome browser
AA seq
1537 aa
AA seq
DB search
MADDEQPIGAVGRRRNRGAEASARAGALERLKALRHGGRRSEAGGFQIKMENPIYDTVGD
DEYDALVAKRREEVRGFIVDDDGLGYCDEGEEEDWTRAGPSSDESDGGDRPKRRRAEKKD
KDKEKEARPKKPNSSLTAAAAMMGKQRLSSMFTSSVFGKTRDNERGKGLNCDSIVDDVIA
EFAPDEEDREKRRRGHSNKSFMPISCVKSERGSDGGVGLTRKAELNIVVANGSDSVLINE
GANENEGKKDLGFEIDDPPSEQTHNVSENGGVIEEKRVDFVEEKVAAVVKKEEVFTLNAK
IKEDNKDPALSAMAGWKAVKTGGDGDIGSGTVEVNSGSNGEETSDFDLEEDGSLPFYVLD
AYEELYGANIGTLYLFGKVKAGSTYQSCCMVVKNMQRCVYAIPDGSVFHTDEMMKLGKDA
VESRISSTDFRKKLHDVASGLKNDIAKKLLDLNVSNFSMAPVKRKYAFERSDIPAGENYV
LKINYPFKDPPLPADLKGETFCALLGTHCSALELFLVKRKIKGPSWLSVSKFSICPAPKR
VSWCKFEVIVDSAKDIGVSNCPKKTAESPPVVVSAISLKTIINQKHNVNEIVSASVICCH
KAKIDTPVLTSEWTRPGMLSHFTVIRKLNGGIFPMGFTKEAMDKNSKAGSNVLSIESSER
ALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSVMPKLA
KGSTIFGSGASPGIMSCISGRLLCDTYLCSRDLLKEVSYSLTQLAKTQLNKDRKEIMPHD
IPRMFQKSEFLMELIEYGETDAWLSMELMFHLSVLPLTRQLTKISGNLWGKTLQGARAQR
VEYLLLHAFHAKKYIVPDKYPHPRETKLTKRRIDNGSDERNVDELDVNDVNIDNDAHSGH
GKGKKGPAYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSQEGLAPRL
PSSKTTGLLPELLKDLVERRRNVKKWMKTASGLKIQQLDIQQQALKLTANSMYGCLGFSN
SRFYAKPLAELITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAKAKAIAW
KVIQEVNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKNETPYEVIERKGLDMVRRDW
SLLSKELGDFCLSQILSGGSCEDVVESIHNSLMKVQEDMRKGQVALEKYIITKTLTKPPE
AYPDAKNQPHVQVAQRLKQSGYSTGCSVGDTVPYIICCEQGAGSVNSTGIAQRARHPDEL
KREDGKWMIDIDYYLAQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFKVNSSEAVRDD
PSSLSLAVDDEERYQGCEPLILACPSCSGTFDCPIILNSISKSITGKSTRPQAEESTIDF
WHQLRCPKCPGEGDVGRLSPAMIANQVKRQADSFVSMYYKGTMTCDDDTCKYNTRSLNLR
LVGDSERGTVCPDYPRCNGRLVRKYTEADLYKQLSFFCHVLDTVRCIEKMEASTRLPLEK
EFAKIRPIVDLAASTVQRIRDRCAYGWIQLQDFCVTV
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgagcagccaattggggccgtcgggaggcggcggaaccgaggagctgag
gcgtcggcacgtgccggagccctcgagcgcctgaaagctcttcgccatggcggccgccga
tccgaagctggtgggttccagatcaagatggagaacccgatctacgacacggtcggtgac
gacgagtacgacgcgctagtcgcgaaacgacgcgaagaggttcgaggtttcattgtcgac
gacgatggcctggggtattgcgatgagggcgaggaagaggattggacccgggctgggcct
tcttccgatgaatctgacggcggcgataggccgaagaggaggagagccgagaaaaaggat
aaggacaaggagaaggaggctcggcccaaaaagcccaattcttcgcttactgctgcggcg
gcgatgatggggaagcagaggctgtcttcgatgtttacgtcatcggtgtttgggaaaact
agagataatgagagggggaaagggttgaactgcgatagtattgtggatgatgtgattgca
gagtttgcgcccgacgaggaagacagagagaaacggaggagggggcattcgaacaagagt
ttcatgccgatttcttgtgttaagagtgagagagggtctgatggtggtgttggtttaaca
aggaaggctgaattgaatatagttgttgcaaatggtagtgattctgtgctgattaatgaa
ggggctaacgaaaatgagggcaagaaggacttgggttttgaaattgatgatcctccaagt
gagcaaacacataatgtttcagaaaatgggggggtaattgaggagaaaagggtggatttt
gttgaggagaaagtggcagctgtggttaagaaggaagaggtttttactttgaatgcgaag
attaaggaagataataaggacccggcattgagcgctatggctggatggaaggcagtgaaa
actggaggggatggggatattggaagtggtactgtggaggtcaacagtggctcaaatggt
gaagagacttcagattttgatctggaagaagatgggtcactgcctttttacgtgcttgat
gcttacgaagagttatatggagctaatataggcaccctttatctatttgggaaggtaaaa
gcaggaagtacataccagagttgttgtatggttgtaaagaacatgcagagatgtgtctat
gcaattccagacggttctgtatttcacactgatgaaatgatgaagcttggaaaggatgct
gtagagtcaaggatttcatccacagatttccgtaagaagctacacgatgtggcttcaggt
ttgaaaaatgacatagcaaagaagttgttggatctcaatgtatcaaattttagcatggca
ccggttaagaggaaatacgcatttgagcgatctgacatacctgcaggagagaattatgta
cttaagatcaattatccattcaaggatcccccacttccagcagatctaaagggcgaaact
ttctgtgctcttctaggaactcattgcagcgcattggagcttttccttgttaaaaggaag
ataaaaggaccttcctggttatcagtttcgaagttttctatctgcccagccccaaaacgg
gtgagttggtgcaaatttgaggtgatagttgattctgcaaaagacataggggtttcaaat
tgcccaaagaaaactgcagagagtcccccagtggttgtttctgcaataagtttaaaaact
attatcaaccaaaagcataatgttaatgaaattgtctctgcatctgttatctgttgtcac
aaggccaagattgacactcccgtgttgacctcagaatggacaagacctggtatgctgagc
cattttactgttatccgtaagcttaatggaggcatatttccaatgggattcactaaagag
gctatggataagaactctaaagctggatcaaatgttttaagcattgaaagcagtgaaagg
gctttgctaaaccgtttgatgattgaattatacaagttggatagcgatgttcttgttgga
cataatatatctgggtttgacctggatgtccttctccacagagctcaggtttgcagagtg
ccaagcagcatgtggtccaaaataggccgcctcaagcgttctgtgatgcctaagcttgca
aaaggaagcaccatttttgggtctggagcaagtcccgggatcatgtcctgcatttctggt
cgccttctgtgtgatacatacttgtgttcccgtgacttattgaaggaggttagctattct
ttgacacaacttgcaaagactcagctgaacaaagaccgaaaggagatcatgccacatgat
attcccagaatgtttcaaaaatcagagtttctcatggaacttattgaatatggagagacg
gatgcatggctgtctatggaactcatgtttcatttgagtgttcttcccctcacacgtcag
ctgactaagataagtggtaacctgtggggaaaaactctacaaggtgctagggcacaaaga
gtagaatatcttttactgcatgctttccatgcaaagaagtatattgttccagacaagtat
cctcatccaagggaaacaaaattgacaaagcggagaatagataatggttctgatgagaga
aatgttgatgagttggatgtaaacgatgtaaatattgataatgatgcacatagtggtcat
ggaaaaggcaaaaaaggtcctgcctatgcaggtggattggtcttggagccaaagagaggt
ttatatgacaagtatatattacttctggacttcaatagtctttacccgtctattattcag
gaatacaatatatgcttcacaacagtggagagatctcaggaaggattggctcctcgtttg
ccatctagtaagacaactggacttctacctgagttgttaaaagatctagttgaaaggagg
agaaacgtgaagaaatggatgaagactgcatctggtctcaagattcagcaacttgacatt
caacagcaagctctaaagctgactgcaaacagtatgtatggatgcttggggttttcgaac
tcgagattttatgcaaagccactggcagagcttataacactgcaagggagggagattcta
caaagtaccgttgatcttgttcaaaacaatttgaacttagaggtaatctatggtgataca
gattcaataatgatttacagtggactggatgatattgcgaaagcaaaagcaattgcatgg
aaagtcattcaagaggttaacaaaaagtatagatgtttagaaattgatcttgacggtttg
tacaagagaatgctgcttctcaagaaaaagaaatatgcagctgtaaaggtgcaattcaag
aatgagacaccatatgaggttattgaacgtaagggcctcgatatggttcgccgagactgg
agcttactttcaaaggaactgggagatttctgcctaagtcagattttgtcaggagggtca
tgtgaggatgttgttgaatcaattcataactctctgatgaaggtgcaagaggacatgaga
aaaggacaagttgcccttgagaaatatatcatcaccaagacattaactaaaccacctgaa
gcatacccagacgccaaaaaccaaccacatgttcaagtggcacaaagattgaagcaaagt
ggttattcaacgggttgctctgttggcgatacagtcccctatatcatttgctgtgagcag
ggggctggttcggttaattcaactggtattgctcaacgtgctagacatcctgatgaatta
aaacgagaagatgggaaatggatgattgacattgattactacttggcccagcagattcat
cctgtggtatcacgtctttgtgcttcaattcagggaaccagccccgaacgcttagctgat
tgtttagggctcgactcttctaagttcaaagttaattcaagcgaagctgtcagagacgac
ccttccagcttgtcccttgctgttgatgatgaagagagatatcagggttgtgagcctttg
atcttggcttgtcctagctgctctggtacttttgattgtccaattatcttgaattccatt
tcgaagtcaatcactggaaagtcaacaaggccacaagctgaggaatctaccatcgatttt
tggcatcaactgcggtgtccaaaatgtccaggggaaggtgatgtgggcagactgtctcct
gcaatgatagccaaccaggtgaaaaggcaagcagacagttttgtttcaatgtactataag
ggcacaatgacgtgtgatgatgacacttgcaagtacaacacacgaagtctcaatcttcgg
cttgttggtgattctgagagaggaacagtttgtccagactatcctcgctgcaatggacgt
cttgtaagaaagtacacggaagcagatctgtacaagcagctctcatttttctgccatgtc
ttggatacagtacgctgcattgaaaagatggaggctagcactagattgccactagaaaag
gagtttgccaaaattcggccgattgtggatttggctgcctcaacagttcaaaggattcgg
gaccgttgtgcctacggatggatacagctgcaagatttttgtgttacagtttag
DBGET
integrated database retrieval system
