Prunus mume (Japanese apricot): 103340065
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Entry
103340065 CDS
T03196
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103340065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103340065
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103340065
Prokaryotic type
Archaeal type
TFB
103340065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
103340065
NCBI-ProteinID:
XP_008241653
LinkDB
All DBs
Position
LG8:10781367..10784158
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AA seq
498 aa
AA seq
DB search
MRCPYCLAGQGRCATTTNSRRSITECTSCGRVVEERQSQFHCLFHLRAQDNPLCLVTSDL
PTLHHQAQPNNAAAADDDPFEPTGFITAFSSPSSSTVVVDNLRAYMQIIDVASILGLEYD
ISDHAFQLFRDCCSTTCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGK
YIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQKLATHIGEVVINKCFCTRRNPI
SISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPE
RAFPTTVIASGRSSTSKVDLVEIPVYLEREKLPEIKPNKPNEGLDMNVPAIGKEEFEFKG
NSRGAQTTVLNQSTTFWQQQVPYGTSGLRTAGKNSHNGTEGIDIDEPQRNQQPNQQFEQK
MGMDSNSLTSTRKPTQILTPPASGACSVTRQFRCPPPSSGSSPNVLYVLPPNLAPGYTEL
RGGGSQNVSENAKQSGDA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcccgtactgcttggccgggcaaggccggtgcgcgacgacaacaaactcccgt
cgttcgataacggagtgcacgtcgtgtggccgtgtggtggaagagcgccaatcccaattc
cactgcctcttccaccttcgcgcccaagacaaccctctctgcctcgtcacctccgacctc
cccaccctccaccaccaggcccaacccaacaacgccgccgccgccgacgacgacccgttc
gagcccaccggattcatcaccgccttctcatccccgtcgtcttccaccgttgtggtcgat
aatctcagggcctacatgcaaatcatcgatgtcgcttcgatcctgggcttggaatacgac
atctcagaccacgcgtttcagctcttcagggactgttgctccactacttgcttgaggaat
cgcagtgttgaagctctcgctactgctgctcttgtgcaggccatcagagaagcccaagag
cccagaaccctccaggaaatctcaattgcagccaatgtgccccaaaaggaaattggtaag
tacatcaagatacttggagaagcactgcaacttagtcagcccatcaacagcaactccata
tctgtccatatgccgcggttttgcactctcctccagctcaataaatctgctcagaaactg
gcaactcacattggagaggttgtcataaacaaatgcttctgcactcgtaggaaccccatt
agcatctccgcagctgcaatatatttagcctgccagcttgaagacaagcgaaaaactcag
gcagagatttgtaaggtgactggtcttactgaagtcactctccggaaagtttacaaggag
ctgttggagaattgggatgacttgctcccatctaattatactccagccgttcctccagaa
agagcattcccaaccactgtaatcgcttcaggccgttcttcaacatctaaagttgattta
gttgaaataccagtttatttggagagagagaagctgcctgaaataaaacctaacaaacca
aatgagggattagacatgaatgttccggccataggtaaagaggagtttgagtttaaaggt
aattctcgaggtgcgcaaaccactgttttgaatcaatcaacaactttctggcaacagcag
gttccatatggtacttctggtttaaggacagcaggaaagaactctcataatggcactgaa
ggaattgacatcgatgagccgcaacgtaaccagcagcctaaccaacagtttgagcagaag
atgggtatggactcaaacagtcttactagtacacgaaagccaactcaaattttgaccccc
ccagcttcaggtgcatgctcagttaccaggcagtttcggtgccctccaccgtcatcaggt
tcttctccaaatgttttgtatgtgctgcctccaaacctggcaccaggttatactgaactt
agaggtggcgggagtcaaaatgtaagtgaaaatgccaaacagagtggggatgcctag
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