Prunus mume (Japanese apricot): 103340088
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Entry
103340088 CDS
T03196
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103340088
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103340088
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103340088
NCBI-ProteinID:
XP_008241679
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All DBs
Position
LG1:complement(21569071..21572025)
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AA seq
376 aa
AA seq
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MGNSHCHRKRRNGPVSSKTDNSGFKYGPSDQSAQIPSSSAKKTSMVALPYAHVDATLRAL
AAQAEGFGRLAIGGLRGALYHVTTLADDGPGSLRDGCRKKEPLWIVFEISGTIHLSSYLN
VSSYKTIDGRGQRIKLTGKGLRLKECEHVIVCNLEFEGGRGPDVDGIQIKPNSKHIWIDR
CSLRDYDDGLIDITRGSTDITISRCHFSQHDKTMLIGSDPSHIDDRCIRVTIHHCFFDGT
RQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQIFSECNIYEAGQKKVAFKYLTEKAAD
KEVAMTGHIKSEGDLFITGTQAGLTPVGVEHSMFHPNQHYQTYTVGPPTDDLKHVLQHCT
GWQSVPRPADQTGVAW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggcaactcccactgccaccgtaaacgtcgtaacggccccgtctccagtaaaacggac
aattcgggctttaaatatggtccgtcggatcaatcagcccaaatcccgagctcgtcagct
aagaagaccagcatggtggccttgccgtacgctcatgtcgacgcgaccttgcgagccctc
gctgcccaggccgaaggcttcggccgcctcgcaattggtggcctccgcggtgccctttac
cacgtcaccactctagctgatgatggtcctgggtcacttagggacggatgtcgtaagaaa
gaaccactttggattgtctttgaaatttcaggcactatccatctctcatcttacttgaat
gtgtcatcgtataagactatagatggcaggggtcagaggattaaacttacagggaagggg
ttgaggcttaaggaatgtgagcatgtgattgtatgcaatttagagtttgaaggtggtaga
gggccagatgttgatggcattcaaataaaacccaattccaagcacatatggatagatcgg
tgcagccttcgtgattatgatgacgggcttatagatatcaccaggggaagcacagatatt
acaatttcgaggtgccatttttcacagcatgataagacaatgctaattggatcagacccc
tctcatattgatgacagatgcatccgggttaccattcaccactgttttttcgatgggacc
cgacagcggcatcctcgtgtcagatttgcaaaagtacatctatataacaattacacccga
aactggggcatatatgctgtttgtgccagtgtagaatcgcagatattctctgaatgcaat
atatatgaagcgggacagaagaaagtggcatttaagtaccttacggagaaggcagcggac
aaggaggtggcaatgactggccacattaagtctgaaggggacttatttataactggaact
caagctggattaacgcccgtgggtgtcgaacacagcatgtttcatcctaaccaacactat
cagacatatacggtaggacctcccaccgatgatcttaaacatgttctccaacattgtaca
ggatggcagtctgttccacggccagctgatcagacaggagtagcatggtag
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