Prunus mume (Japanese apricot): 103340277
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Entry
103340277 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103340277
KO
K10756
replication factor C subunit 3/5
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03030
DNA replication
pmum03410
Base excision repair
pmum03420
Nucleotide excision repair
pmum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103340277
03410 Base excision repair
103340277
03420 Nucleotide excision repair
103340277
03430 Mismatch repair
103340277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103340277
03036 Chromosome and associated proteins [BR:
pmum03036
]
103340277
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103340277
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103340277
DNA Replication Termination Factors
ELG1-RFC complex
103340277
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103340277
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103340277
Check point factors
HRAD17(Rad24)-RFC complex
103340277
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
Motif
Other DBs
NCBI-GeneID:
103340277
NCBI-ProteinID:
XP_008241892
UniProt:
A0ABM0PMW7
LinkDB
All DBs
Position
LG8:11026295..11029942
Genome browser
AA seq
784 aa
AA seq
DB search
MENKWSRHGRNSVTPVKQRRSGYEPSDAETEISDSPWHGGKMRINVGLEYEGTKAELDLS
RNISPLKQSTRHSSRIEYDGPSLRANSVVSPVRRRNSSKSPYKPRRDDGNARNSPLAGSD
LLRNISPLSKSERRRHVSPFQAERGEHDLYGFDDEIVGSNRKQQHHRRNSREEKKPNYSR
RSTTAPRHRSPREVDQQNSYESQTPTKGERSRTPTKVQRTPSPLSKNMAQKQRPVNSQMK
SPSVGEINEMLANAKLARTSPNPMSNNKTPVFGSSDSISPGDIFFSRECTVMALPRKVLT
KNGDFESPYSPKRKMVPQRDFAASQHRSRTNGSYDLNGNGKGTPSPYGLSQMTTTTSSSA
VSRQSSGTLSVGSGKRSDASGTTTASMRKFTANRRKSESQAWFSCMRKGACKTNKSPERG
TFNEAAFIEKAFVVESLRQFWADKHQPASLNGFTCHKQEAQILKQLVIDNISPHILFTGP
SGSGKKALTMAYLRETYGDSSWEEQKPIQVVVPLTSSAHHVELNVQLEANARYALMGLVR
EINNENAIAPEVSSVNFKANHKVMVLYGVDKAAEHIQHLIKWIMDCYSEACKLILCCEND
AAVIESVKNRCKVIKVDAPVTHEIMEVLIQIARKEDFDLPMSFANKIAIKSKQNLRKAIM
GLEACKAHNYPFGDDQPIPLGWEEVLLELAAEILADPSPKRLFFIRGKFQKLLVDFVHPK
LILLKLVEQFLMGLHGSSKRELYYWHAYYEKRLPAGASALLKLEEFMAKFMSIYRKSSNN
RQNA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaatggtcaaggcatggtagaaattctgtgactccagtgaagcaaaggagg
agtggatatgagccgtctgatgctgagactgaaatctcagatagtccatggcacggcggc
aagatgaggattaatgttggcttggaatatgaagggacaaaagcagagttggatttgtca
agaaacattagccctttgaagcagagcacgaggcactcttcaagaattgaatatgatggc
ccttctcttagagctaactctgtagtgagccccgttcgaagaagaaatagcagcaagtca
ccctacaagccaaggagagatgatggtaatgcacgaaattcaccgttggcgggttctgat
cttcttagaaatattagccccttgtcaaaatctgagcgcagaagacatgtttcacctttc
caagctgagagaggagagcatgatttgtatggctttgatgatgagattgtgggctcaaac
agaaagcaacagcatcacagaaggaacagcagagaggagaagaaaccaaactacagcagg
agatcaacaactgctccaagacatagatcaccaagagaagttgaccaacaaaacagttat
gagtcccaaacaccaactaagggggagagaagtagaacaccaactaaagtgcagagaaca
ccatcaccattgtcaaaaaacatggctcagaaacaaaggccagtgaactcccagatgaaa
tcgccgtccgttggtgaaatcaatgaaatgcttgccaatgcaaagcttgctagaacttct
ccaaatcccatgtccaataacaaaactccagtttttggaagctcagactccatatcacca
ggtgacatcttcttttctagagagtgcacagtcatggcattgccaagaaaggtcttgacg
aaaaatggtgattttgagagcccctatagtcccaagcgcaaaatggttccccagagagac
tttgctgcctctcaacacagaagcagaacaaatggtagttatgatcttaatggtaatggt
aaagggactccatccccttatggcttgtcacagatgaccactaccacatcaagctccgcc
gtgagcaggcagagcagtggtacgcttagcgttggaagcggcaagaggagtgatgcaagt
gggaccacaacggcaagcatgaggaaattcacagccaatcgaaggaaaagcgaaagtcag
gcatggttttcgtgtatgagaaagggtgcttgcaagactaacaaatcacctgagcgtggt
acattcaatgaagctgcattcattgagaaggcatttgtggttgagagtctcagacagttc
tgggctgataagcaccaacccgcttcgttgaatggattcacttgccacaaacaagaagct
caaattctcaagcaacttgtgattgacaacatctctcctcatattttgttcactggacca
tctggttcggggaagaaagctctaacaatggcttatctacgagaaacatatggtgattca
agttgggaagaacaaaagccaatccaagtagtggttccattgacatccagtgctcaccat
gtagagctcaatgtacaattggaagcaaatgctagatatgcattaatgggtttggtcagg
gaaataaacaatgagaatgcaattgctcctgaagtcagctctgttaatttcaaggcaaat
cataaagtgatggttctttacggtgttgacaaagcagcagagcatattcagcatttgata
aaatggataatggactgttactcagaagcttgtaagctcatactctgctgtgaaaacgat
gcagctgtcatcgaatcagtgaaaaaccggtgcaaggttatcaaggttgatgctcctgta
actcatgaaattatggaagttcttattcagatagcaaggaaggaagacttcgacctacct
atgagctttgctaataagattgctattaaatcaaagcagaacttgagaaaagcaatcatg
ggtcttgaagcatgcaaagcacacaactatccttttggagatgatcaaccaattccgctt
ggatgggaagaggtgctgcttgaactcgctgctgaaatcctagctgatccatcacctaag
agattatttttcatccggggaaagtttcaaaagcttctcgttgattttgtgcatccgaaa
ctgattctactgaagctcgtggaacagttcctgatgggactgcatggtagttctaaaagg
gaactttattattggcatgcttattatgagaaaagactcccagcaggagcgagtgcttta
ctgaaactagaagaatttatggcaaagttcatgagcatataccggaagagttccaacaat
cgtcaaaatgcttag
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integrated database retrieval system
