Prunus mume (Japanese apricot): 103340292
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Entry
103340292 CDS
T03196
Name
(RefSeq) uncharacterized protein LOC103340292
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103340292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103340292
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
103340292
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
103340292
NCBI-ProteinID:
XP_008241908
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Position
LG1:complement(21656002..21659458)
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AA seq
648 aa
AA seq
DB search
METGSHGSMRKVKNGGLKVLWAEQLRSMKNEFKRDHHHPSWQMAIQSHIDATHALVQLAN
EDPSLLHGGLHSHGMKHSVKGIPSIKDSKGMSRGDSHSDVAGRKVNFLVKRQKTDFGGSM
KDEDAAAVLDFHLPAVPYPAGRKRKKMKMFKKLSSLVPKYMKSNVSEKDDNVNEPCQLLD
SRGHDRLRMLMAKKRKRVAGSYSKRKTVEVAAPVNLPLKRQGFKLPVPTVHTGFSFSIVH
LLTAIRRAMVVPHAEGDDVVYGNAQGVSNAEGIIRFYSLKDKGISDSVLTNSKSLPSLTL
NKIVERVRSTPMDPSILQTQEPLQDLLRGVLEIFSSKTAPLGARGWKPLTFYRKSSKCWS
WIGPINVNSCNADEEYVSSKAWSLRHNVLVKLVDSFAIWYKSFQERIRQVGSLPAPPLIL
MQPTLDESEWFRDIMSRKNAISPNSEEVRAYFQREEALRYLVPDMAFSYTALDGRKSAVA
PLTSCSGKPSYRNRDHFMLKADRPPHITNLCLVRDAASRLPGSIGTRENVSTLVRHSQYI
VEDVSDEQLTHVIRSALSRLQYEFDPCVEFDRHRKLWVYLHGERGEEDFEEDGTLSTLRR
RRHRDMSLSNLSAHETALLNGQEETCMLSAEGNNLDVNVDTLLSGDRK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggaagccacggttcaatgaggaaagtgaaaaatggaggactcaaagtgctg
tgggcagagcagttgagaagtatgaaaaatgagttcaaaagagaccatcatcatccatct
tggcaaatggctattcagagtcatatagatgccacacatgctttggtacagttggctaat
gaagatcctagtctgcttcatggcgggttacattcacatggaatgaagcatagtgtgaaa
gggattccaagcataaaggattcgaaggggatgtcgaggggtgatagtcattcggatgtg
gctgggagaaaggttaattttttggtaaagcgtcagaaaaccgactttggaggttctatg
aaggatgaagatgctgcagcagtcttagattttcatttgccagcagtgccatatcctgca
gggagaaagcggaaaaagatgaaaatgtttaagaagctatcttcgctcgtaccaaaatat
atgaaaagtaatgtcagtgagaaggatgataatgtgaatgaaccatgtcagttgttggat
agtcgtggtcatgatagactacgcatgttaatggcaaagaaacggaaaagggtggcagga
tcctattcaaaaagaaaaactgtggaagttgcagcaccagtaaatttacccttgaaaagg
cagggattcaaattgcccgttcctactgttcatacaggattttcattctccattgtgcat
ctccttactgccattcgaagagcaatggttgttccacatgcagaaggtgatgatgtggtg
tatggaaatgctcaaggggttagcaatgctgaagggataattcgattttattctctcaaa
gataaaggcattagcgattctgtactaacaaattccaaaagtttaccttctctcactctt
aacaagattgttgagcgtgttagatcaactccaatggatccttctattcttcaaacccaa
gagccccttcaagatttactcagaggggttttggagatattttcatccaaaacagcgcct
ttaggagctaggggatggaagccactcactttctatcgcaagtccagtaaatgttggtca
tggattggtcccatcaacgttaactcatgcaatgctgatgaggaatatgtatcttctaaa
gcttggagtcttcgccataatgtgcttgtgaagttggttgattcctttgctatttggtac
aagagttttcaagagagaattcgtcaagttggaagccttcctgcaccacctttgattttg
atgcaaccaacactagatgaaagcgaatggttcagggacataatgtctcgaaagaatgct
atcagtccaaactctgaagaagtaagagcatactttcaaagggaggaagctttgaggtat
ttagtcccagatatggcattttcttacacagcactggatggtcgaaagtctgcagttgct
cctctaactagttgcagtggtaagccatcatatagaaaccgagatcattttatgcttaaa
gctgatcgaccgcctcatatcaccaatctctgtcttgtgagagatgcagcttctagatta
cctggaagtattggtaccagagaaaatgtttctactcttgttcggcactcacagtatata
gtggaagatgtctctgatgaacaacttacccacgttattaggtctgctctgtctcggctg
caatatgaatttgatccatgtgtagaatttgacagacacagaaagttgtgggtatattta
catggagaaagaggcgaagaggactttgaggaagatggtaccttatctactttaagaagg
agacggcatcgagacatgtcattgagcaatctatctgctcatgagacagccctcctaaat
ggacaggaagaaacttgcatgttatctgcagaaggaaacaatctggatgtcaatgttgat
accttattgtcgggtgatagaaagtaa
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