Prunus mume (Japanese apricot): 103340308
Help
Entry
103340308 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 3.6-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103340308
Ion channels [BR:
pmum04040
]
Ligand-gated channels
Glutamate (ionotropic)
103340308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
SBP_bac_3
Peripla_BP_6
Lig_chan-Glu_bd
TgpA_N
Motif
Other DBs
NCBI-GeneID:
103340308
NCBI-ProteinID:
XP_008241924
LinkDB
All DBs
Position
LG8:complement(11786025..11789670)
Genome browser
AA seq
912 aa
AA seq
DB search
MVFYNGASSNGLGANVTTARPDVVNIGAIFTFDSVIGKIAKVAIALAIEDVNSDPEILNG
TKLTLKMQNTKSSDFLGIIEALQFLENDTVAIIGPQFSATAHVISHIADELKVPLLSFAA
TDPTLSPTQFPFLVRTTRSDLFQMTAVADLVFYYEWRDVIAIYVNDDFGRNAIAALGDKL
AEKRLXISYKVPLNPKATKDEITNALISVSSMESRILILHIYTSWGLQVLIEARNLMMMA
SGYVWIATDWFSTIIDTDPSLPFISTDDIQGVLTLKMHTPESELKKKFKSRWGNLTSARR
VNGSSFGLNTYGLYAYDSVRHLAVALDSFFARGGNISFSNDSNLNELGGGKLNLDALNMF
NGGSQLLQSILEVNTTGLTGPVKFNPDGNLINPAFEVINVIGTGTRTIGYWSNSSGFSLD
PPEKPQKKLQSNGSSTITEQLYSVIWPGQTTQKPRGWVFPDNGRKLRIGVPNRVSYREFV
GIKGTEFTGYCIEVFQAALNELPYGVPYKYVPFGDGKKNPENHELLHLIQIGDFDGVVGD
ITITTGRTKMVDFTQPYIESGLVVVAPIRKSNSSAWAFLRPFTPMMWGVTGIFFLVVGTV
VWILERRTNEDFRGPPRKQFVTIIWFSFSTLFFSQKEKTGSTLGRFVLIIWLFVVLILNS
SYIASLTSILTVEQLSSPVKGIESLATGGDPIGFLKGSFAENYLTDELNIHRSRLVPLNS
PEEYEKALQDGPRAGGVAAVIDERAYMELFLSSRCGYSIVGQEFTKMGWGFAFPRDSPLA
IDMSTAVLKLSEKGDLQKIHDKWLMKSACSAEGAKQAVDRLQIKSFWGLFLLSGIACFLA
LVLHVIRMVHKYYKRPDSDCESSQSRRLQSFVSFVNKREQEVKSRPKRMRTENASSKIVH
EDSSINGLDESV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggttttctataatggtgcttcttcaaatggacttggtgctaatgttactacggcaaga
cctgacgttgtcaacataggcgcgattttcactttcgattctgtcattggaaaaattgca
aaagttgcaatagcccttgcaattgaagatgtcaattctgatccagaaattctcaatgga
acaaagctgacacttaaaatgcagaataccaaatctagtgactttctgggcatcattgag
gctttgcagttcttggagaatgacacagtggccataattggcccccaattctcagctact
gctcatgtaatctcacatattgcagatgaactaaaagtcccactattatcatttgcagca
acagaccctactctgtctccaactcagttcccattcttggttaggacaacaagaagtgac
ctctttcagatgactgcagtagcagaccttgttttctactatgagtggagagatgtcata
gcaatatatgtgaatgatgattttggcagaaatgccattgctgccttaggggacaagcta
gccgaaaaacggttanaaatttcatacaaagtgcctctgaaccccaaggcaacaaaagat
gaaatcaccaacgcactcattagtgtttcttcaatggagtccaggattctgatcctgcac
atttataccagttggggtctacaagtgcttattgaagcacgaaacctcatgatgatggct
agtggatatgtctggattgctactgattggttctctaccataatagatactgatccttcc
ctgccttttatatcaacagatgacattcaaggggttcttacattaaaaatgcacacacca
gaatcagagctcaaaaagaaatttaaatcgcggtggggcaacttaactagtgcaagaaga
gtgaatggctcttcttttgggctaaatacgtatggtctttatgcctatgattctgtaagg
catcttgctgttgcccttgattcattttttgctcgtgggggaaatatttcattttcaaat
gactcgaacttaaacgagttaggcggagggaagttgaatcttgatgctttgaacatgttc
aatggtggcagccagctactccaaagcattttagaggttaacacaactggtttaactggg
ccagttaagtttaatccagatgggaacttgattaatcctgcatttgaagtcatcaatgtg
attggcacagggactaggacaattggttattggtccaactcttctggtttctcacttgat
ccaccagaaaagcctcaaaagaagctgcagtctaatggctccagcaccattactgaacaa
ctatacagcgtcatctggcctggacaaacaactcagaagcctcgtgggtgggttttccct
gacaacggaagaaagctcaggattggtgtcccaaatcgagttagctatcgtgagtttgtg
ggcattaaaggcacagaattcactggctattgcattgaggtctttcaagctgcattgaat
gagttaccatatggtgtcccatataaatatgtcccttttggggatggtaaaaagaaccca
gaaaaccatgaacttctgcacttgatccaaattggtgactttgatggtgtggttggagat
attaccatcaccactggcagaacaaagatggtggatttcacacagccatatattgagtct
ggtttagttgtggttgctccaataaggaagtcgaactctagtgcttgggcttttctgaga
cctttcacaccaatgatgtggggtgtcacaggcattttcttcctagttgtgggaacagta
gtttggattttggagcgtaggacaaacgaggattttcggggccctccaagaaagcaattt
gtcacaattatttggtttagcttttcaactctattcttttcccagaaagaaaaaacaggc
agcacgctcggtcgcttcgtgctaatcatatggctatttgtagttctaatactcaactca
agctacattgcaagcctgacgtcaatcctcacagtggagcagctttcttcacctgttaaa
gggattgaaagtctagcaacaggcggtgatcccattggtttcctgaagggttcatttgcc
gaaaactacttaaccgatgagctaaacatacacaggtccagacttgtacctctcaactca
ccagaagaatatgagaaagccttgcaagatggccccagggcaggcggtgttgctgcagtg
atcgatgagcgtgcatacatggaactcttcctctcttctcgatgcggatatagcattgta
ggtcaagaattcacgaaaatgggatggggttttgcctttccaagggactctccactagca
attgacatgtcaactgcagtacttaaactatcagagaagggtgatcttcagaagattcat
gacaagtggctgatgaaaagtgcttgcagtgcagaaggagcaaagcaagctgtagatcgc
cttcagataaagagcttttggggcctttttctgctgagtggcatagcttgctttcttgct
cttgttcttcatgttattcgcatggtgcacaaatactacaagcggcctgattctgactgt
gagagctcacaatctagacggcttcaatctttcgtttcatttgtaaataaaagggagcaa
gaagtgaaaagcagacccaagagaatgaggactgagaatgcctcaagtaaaatagtgcat
gaagatagtagcatcaatggtttggatgaaagcgtctaa
DBGET
integrated database retrieval system
