Prunus mume (Japanese apricot): 103340471
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Entry
103340471 CDS
T03196
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103340471
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
103340471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
103340471
NCBI-ProteinID:
XP_008242108
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Position
LG8:12643126..12648576
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AA seq
622 aa
AA seq
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MGVVLRDDEAAFRKMGDHDLIDSYLVYRARDTLCSVSLGDTEDYRQLLSAMNPEELGANE
IAMLVTNLKALAGAVSYIDNVLHNELLSAIFNMSLWNYKPDVMDALVEFIESLATSSGKY
VDYCLAMLTCQFFPPGSLPLPKILARKDGVLSRVHSSLKYIADLVPLSPVRLVPIVLDGK
PQYRLNNTSTLSLVIYVENMLKLESGVLGEVVRIPMLAGVVDLLLDLDVEIEWEDIQNDT
SKGIFEMELEDVDESRDDGLNDDSELPRKLSWKTSGGNSFAEKLDSLMVLIFEHLESCQV
ADRLIKIFDTLLESFKKTVLTAYKSKFAQFVIFYACSLDPKNCGVTFALMLEHTFFFSTN
RPLLRMSAVAYLASYLSRAKFLSVFVVADTLERLVDWCVKYVKMQDDVINPEAHRIFYSG
CQAIMYLLCFRMRSMMDDPQLKPWLVRLPLESILNNKLSPLKVCLPSIVLEFLRQAKAAR
LFMTSEKFIFDDYLESKLSREFGGMERLDMFFPFDPCLLEKSDSYIRPNFIFWSMVQPTY
DDEDSSDEDVGEAFASDDDGGMDCGIMQSLEEQHFDFAEVGSALNKMSITPKDSLHSRFG
GAINQPMRMPSRIRPSTSPESL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgtgcttagggacgacgaggcagctttccgtaagatgggagaccatgatttg
atcgattcttacctggtttatcgcgccagagatactctttgctcagtctcgttgggtgat
actgaagattaccggcagctccttagcgctatgaaccccgaagagcttggcgctaatgaa
atagctatgcttgtgacaaatttgaaagcactagctggagcagtttcttacatagacaac
gttctacataatgaacttctctctgcaatttttaacatgagcttgtggaactataagcct
gatgtgatggatgcattggttgaattcattgaatccttggccacttcaagcgggaagtat
gttgattactgtttggcgatgctcacatgccagttctttccacctggtagtttgccactt
ccgaaaattcttgcaagaaaggacggagttttatctcgtgtgcattcatctctgaaatat
atagctgatttggtgccactttcccctgtgagactagtgccaattgttttagatggaaag
ccacaatatcgtttgaataatactagtactcttagtcttgtgatatacgtagagaacatg
ttgaagttggagagtggcgtgcttggagaagtagttcggatcccaatgcttgcgggtgtt
gtggatttgctgctagacctggatgtggagattgaatgggaagacatacaaaatgacact
agtaaaggaatatttgagatggagctagaagatgtggacgagtctagagatgatggtctg
aatgatgatagtgagcttccaagaaaattaagttggaagacttcaggaggaaattcattt
gctgaaaaattagatagcttgatggtgttaatttttgagcatcttgaatcttgtcaagta
gctgaccgtttgatcaagatctttgatactcttctcgagtcatttaagaagactgttttg
actgcatacaaatcaaaatttgcccagtttgtgatattctatgcatgttctcttgatcca
aaaaactgcggtgtgacatttgctttgatgctggaacatactttctttttcagtaccaac
cgcccacttctcagaatgagtgccgttgcttatcttgctagttatttgtctcgtgccaag
tttctgtcagtctttgtggttgctgacacactggaaaggttggtggattggtgtgtgaaa
tatgtcaaaatgcaggatgatgtaataaatccagaagctcatagaatattttattctgga
tgtcaggccatcatgtatttgttgtgcttccgaatgagatcaatgatggatgatcctcag
ctgaagccatggcttgttcgtttgcctttagagtcaattttgaataataagttgagcccg
ttgaaggtgtgtctgccttccattgtattggagtttctacggcaagcaaaagcagccagg
ttattcatgacgtctgagaaattcatttttgatgactacctggaatcaaaactttcgagg
gaatttggtgggatggaaagactcgacatgttcttcccatttgacccatgtctgctggaa
aaaagtgacagttacatccggccaaacttcattttctggtcaatggttcaacctacatat
gatgacgaagattccagtgatgaagatgtcggcgaagcttttgccagtgacgatgacggt
ggaatggattgtgggattatgcagagcttggaggaacaacattttgattttgctgaagtt
ggctctgcattgaacaaaatgtcaatcacaccaaaggattccttacatagtaggtttggt
ggtgcaataaaccaacccatgcgaatgccctcaagaattagaccgtcaactagtccggag
tctttgtaa
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