KEGG   Prunus mume (Japanese apricot): 103340495
Entry
103340495         CDS       T03196                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103340495
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103340495
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_5 zf-RING_UBOX zf-ANAPC11 RING_XB3-XBAT31 PHD_NSD zf-RING_16 zf-C3HC4_4 Rad50_zn_hook FANCL_C zf-Nse zf-C3HC4_3 SLX1_C zf-RING_4 zf-C2HC5 RINGv
Other DBs
NCBI-GeneID: 103340495
NCBI-ProteinID: XP_016651990
LinkDB
Position
LG8:12792334..12793333
AA seq 203 aa
MGLFEEDSSSSGLIVSHVLYKAAFVIALMRWVLYWALRLRQRLLSSSSSSSSSFVSDHGY
NFLEAEHGELQNYPPVPSSCASSSTQLIRDCLVQTTFEEITNRQGSYRASSSGCDTCAVC
LSQLEMEDQVRELRNCSHVFHTECIDRWLEYHDHHDDNHRTCPLCRTPLLTSSQIQSLSW
DHRSQPSWAVERLLYLFGDDLLL
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggtttgtttgaagaagactcgtcctcatcaggcttgatagtgagccatgttttatac
aaagcagcttttgtaattgccttaatgagatgggttttgtactgggctctcagactcaga
caaagactcttatcttcttcttcctcctcctcctcctcctttgtttctgaccatggctac
aatttcctggaggcagagcatggtgaattacaaaactaccctcctgtgccttcctcttgc
gcttcttcttcaacccagttgatcagagactgccttgtgcagaccacctttgaagaaatt
accaacagacaaggaagctacagagccagcagcagtggctgtgacacgtgtgctgtgtgc
ttgagccagctggagatggaggatcaggtgagggagctcaggaactgcagccacgtgttc
cacacagaatgcatcgacagatggctggagtatcatgatcatcatgatgacaaccacagg
acttgcccactctgtaggacccccttgctgacgtcatcccaaatccagagcttgagctgg
gatcacagatcccagcccagctgggctgtggagagactgctctacctctttggggatgat
ctgctgttgtaa

DBGET integrated database retrieval system