Prunus mume (Japanese apricot): 103340511
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Entry
103340511 CDS
T03196
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103340511
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
103340511
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
103340511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103340511
NCBI-ProteinID:
XP_008242152
LinkDB
All DBs
Position
LG8:complement(12950508..12952798)
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AA seq
326 aa
AA seq
DB search
MRTRKPKMEKTVAHSQSQPQSQIEIVNIEDDDAFCFTPISLKRSADHVEEERGLQSIKAG
NFIDLSDETLDFYDDDDELRILRFKPSNTPFGKRTKPFTGPSVTEAGQSSNSKENPSFVC
EICVETKPGNQLFAVENCSHGYCTDCTVNYVASKLQENITNIRCPVPDCKGLLEAEYCRP
ILPPEVFDRWGSVLCESVILGSEKFYCPYKDCSAMLIDDGKEVIKQSQCLNCWRMFCAQC
KVPWHEEIECEEFQKLNKDEREKEAVMLKNLAQQKQWRRCPNCKFYVEKSEGCMFMMCRC
KTAFCYRCGKILKANHGHNCPNCRGR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaggaaacctaagatggagaaaacagtggctcactctcagtctcagcctcag
tcccaaattgagatcgtgaacattgaagacgacgatgccttttgcttcacacccatttca
ctgaagcgctcagcagaccacgtggaagaggaaagaggccttcaatcgatcaaagcaggt
aactttatcgacctttctgatgaaactctagacttttacgacgatgacgatgagcttaga
attcttaggtttaaaccctcaaacaccccctttggaaaacgaacaaagccctttacgggt
ccttctgtgaccgaagctgggcaatcttccaattccaaggaaaacccatcttttgtttgt
gaaatctgtgttgaaaccaagcccggaaaccagttgtttgcggtagaaaattgcagccat
gggtattgtactgactgtacggtcaactacgtggcctcgaagcttcaagagaacatcaca
aacattaggtgccctgttcctgattgtaaagggttgctagaggccgagtattgtcgacca
attctgccccctgaggtgtttgataggtggggaagtgtgttgtgtgagagtgtgattctt
gggtctgagaagttttattgtccctataaggactgctctgctatgttgattgatgatggg
aaagaggttataaagcaatcacagtgtctcaattgttggagaatgttctgtgcccagtgt
aaggttccttggcacgaggagattgagtgcgaagaatttcagaagttgaataaggatgag
agggaaaaggaagctgtcatgttgaagaaccttgcgcagcagaaacaatggagaagatgc
cccaattgtaagttctatgtggaaaaatcagagggttgcatgttcatgatgtgcaggtgc
aaaacagctttctgctacagatgtggtaaaattttaaaagccaatcatggccacaattgt
cccaattgtagggggcgttga
DBGET
integrated database retrieval system
