Prunus mume (Japanese apricot): 103340579
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Entry
103340579 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103340579
04131 Membrane trafficking [BR:
pmum04131
]
103340579
04121 Ubiquitin system [BR:
pmum04121
]
103340579
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103340579
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
103340579
Membrane trafficking [BR:
pmum04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
103340579
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103340579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_5
zf-C3HC4
IBR
Motif
Other DBs
NCBI-GeneID:
103340579
NCBI-ProteinID:
XP_016648328
LinkDB
All DBs
Position
LG1:complement(20247902..20251566)
Genome browser
AA seq
473 aa
AA seq
DB search
MLQIRLKSVAPPEGAAGVKPLPAETVTVACPDHLVLADLPVAKGIGASTIASIVKTVGRR
SRRQLGERVHFCVRCDYPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKLME
GIFICAAPHCLNSFLKRSEFESHIHENHAYLLQPNADKMDGNESEARSTKQGTVSESTGR
APPRPVFSPGSNSQLHDREDKARLQQPREQSLPRPVMQPNPAPAFGQLQNNPADLSRPPG
FDRPSPHNLFHQQSYDSVGNTMQESGQFSDKQQTPFSEYPPMHSIQPPNYAVPINSNQVR
MPSLPFAYPFPVDGSQPFYNAPYEIARQDSAPDVGQEQGSLLGFPQGSXXXXXFAASYPQ
SWNAGQAGVPFEAAQGGQGTADGFSNSSESQGQVAFYQGEYGRNPGGMPFNPQHMTNKAM
EAVQGGNSMDPRDGKGILASQPMPLPPPPPPPPHMSQLNRQFYQGDTGRDGQG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagatccggcttaagagtgttgcacccccagagggtgctgcaggggtaaaaccc
ttgccagcggagactgtgacagttgcatgccctgaccaccttgtccttgctgatcttcct
gttgcaaagggcattggtgcatcaaccattgcttcaattgtcaagactgtaggtcgcagg
tcccgtcgccagcttggagaacgggttcacttttgtgttcgctgtgattacccaattgct
atctatggacgcctgagcccttgtgagcatgccttttgtctggattgtgctaggagtgac
tccatctgctatctttgtgatgaacgcatccagaagatccagacgatcaaattgatggag
ggaatctttatttgcgcagcccctcactgtctgaattctttcctaaagaggagtgaattt
gaatctcatatccacgagaaccatgcttaccttcttcagccaaatgcggacaaaatggat
ggaaatgaatcagaagctcggagtaccaaacaaggtacagtatcagaatccactggccgt
gctccaccaaggccagtcttttctcctggttcaaattcccagctccatgaccgtgaggac
aaagctcgtcttcaacagcctagagaacagtcacttccaaggccagtcatgcagcccaac
ccagccccagcttttgggcaacttcagaataacccagcagatctcagtcgtcccccaggc
tttgacaggcctagtccccacaatctcttccatcaacaaagctatgattcagtgggtaat
acaatgcaggaatctggccagttttcagataagcagcagactcccttttctgaataccca
cccatgcattctattcagccccccaattatgcagttcccattaattcgaatcaagtgcgg
atgccctcccttccatttgcctatccttttcctgttgatggatctcaaccattttataat
gctccctatgagattgcacggcaggattcagcaccagatgttggacaagaacaggggtcg
ttattgggttttccccaaggttcnnnnnnnnnnnnnnntttcgctgctagttatccacag
tcttggaatgcaggacaggccggtgttccttttgaagctgcacaagggggtcaaggaact
gcagatggtttctcaaactcctcagagtctcaaggacaagttgcattttatcaaggagaa
tacggacggaatccagggggtatgcctttcaatcctcagcatatgaccaacaaagcaatg
gaagcagtgcagggtggaaattctatggatccaagagatggcaaaggtatattagcatca
cagcccatgccgcttcctccgccgcctccaccccctcctcacatgtcgcagctcaatcgt
cagttttatcaaggtgataccggtcgagatggacaggggtag
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