Prunus mume (Japanese apricot): 103340604
Help
Entry
103340604 CDS
T03196
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03440
Homologous recombination
pmum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103340604
03460 Fanconi anemia pathway
103340604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103340604
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103340604
Enzymes [BR:
pmum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103340604
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103340604
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
103340604
Bloom's syndrome complex (BTR)
103340604
FA (Fanconi anemia) pathway
103340604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Methyltransf_35
Motif
Other DBs
NCBI-GeneID:
103340604
NCBI-ProteinID:
XP_008242257
LinkDB
All DBs
Position
LG8:complement(13422478..13429020)
Genome browser
AA seq
728 aa
AA seq
DB search
MKKSPLPLQNACGGSKNQSLGKEALVKLLRWHFGHPEFRGKQLDAIEAVLSGRDCFCLMP
TGGGKSMCYQIPALAKKTGIVLVVCPLIALMENQVMALKEKGIAAEYLSSTQATQTKNKI
HEDLDSGKPSLRLLYVTPELIATPGFMTKLRKIHTRGLLNLVAIDEAHCISSWGHDFRPS
YRKLSTLRSHLPGVPILALTATAVPKVQKDVIESLCLQHPLILKSSFNRPSIHYEVRYKD
LLDDVYADLSDVLKSSGDVCAIVYCLERTMCDDLSAHLSKNGISCAAYHAGLNDKLRSSV
LDNWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLLSRSLL
YYGIDDCKRMKFILSNADNKKSKASNSQEELSKKTLTDFQQMVEYCEGSGCRRRKILETF
GEKVPASLCGKTCDACKHPNLVAKYLEELANTCIVRQKFGSSQIFMSSSSDTINEVRTSE
FWNRDDEESCSEDDISDSDDGLAVKNLARSKLPKKLGISEKIECLQRLEERYYPDKSSDK
QINKPEKNAISDTLRETSKQRLQNALKQAQQRLGNLKIEVEKSASFLENECYNKYGKTGK
SFYYSQVASTVRWLSSADYTGLTNRLGTINSSLSDDAPPETEPPAARSPLVEGPTEITSS
DFHDSIRSETSVAVSPTEIASPSTRLPPIPSFSQFINTRKTKDNRSSASEKKSPNGVQKN
LEKRMRLQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcaccattgccgttgcaaaatgcatgtggcggtagtaagaatcagagtctg
ggaaaggaagctttggtgaagctattgaggtggcattttgggcatcctgaattcagaggc
aagcaattggacgccattgaagctgtcttatcaggaagagattgcttttgtctgatgcca
actggtggcgggaagtcaatgtgttatcagataccggccctcgccaagaaaactggaatt
gtgcttgttgtttgtcctttaatagctttgatggaaaaccaggtgatggcattgaaggag
aaaggaattgctgctgaatatctctcctcgactcaggcaacccaaaccaaaaataagatc
catgaagaccttgattctggaaaaccatctctgaggctgctttatgtgactccagaactg
attgcaacacccggatttatgacaaagctgagaaagattcacacgagagggttgctaaat
ctcgttgccatagatgaggcacactgcatctcttcatggggccacgatttcaggcctagc
taccgaaagctgtcaactttaaggagccaccttccaggtgtaccaatattggctttaaca
gctacagccgttcctaaagttcagaaggatgtgatagaatccttatgtcttcagcacccg
ttaatcctaaaatcttctttcaatcgtcctagtatacattatgaagttcgatacaaagat
cttttagatgatgtctacgctgatttgtctgatgtgctaaaatctagcggagatgtctgt
gcaattgtttactgccttgaacgtacaatgtgtgatgacttgtctgctcatctatcaaaa
aatggaatttcatgtgctgcttatcatgcagggttgaatgataaactacggagctctgtc
ttagataattggatttcttctaagatacaagttgttgtggcaacggtggcttttgggatg
ggtatagatagaaaagatgtcagaattgtttgccattttaatattcccaagtcaatggaa
gccttctaccaagagtcaggtagagctggtcgtgatcaactactctccagaagcctgtta
tactatggaatcgatgattgcaaaagaatgaaatttattctaagcaatgctgataacaag
aagtcaaaggcctcaaactcacaggaagagttgtcaaaaaaaaccctgactgacttccag
cagatggtcgagtattgtgagggttctggatgccgtaggagaaaaattcttgagactttt
ggtgaaaaggtgcctgcatcactatgtggaaaaacatgtgatgcctgcaaacatccaaac
ttagtggccaagtatttggaggagcttgcaaatacttgtatcgtccggcaaaagtttggt
tcatctcaaatttttatgagcagctcttcagatacgattaatgaagttcgaacctctgaa
ttctggaatcgtgatgatgaagaaagttgttctgaggacgacatatctgattctgatgat
ggtcttgcagtcaagaaccttgccaggtcaaagttgccaaaaaagttgggaatcagtgaa
aaaattgagtgcttgcagcgtttagaagaaagatattacccggataaatcttctgataag
cagataaataaaccagagaagaatgctatatctgatacgctgagggaaacaagcaagcaa
agattacaaaatgctctcaagcaggctcagcagcggcttggtaacttgaagattgaagtg
gaaaaatcagcctcttttctcgaaaatgagtgttacaacaaatatgggaaaactgggaaa
tctttttattattctcaagtggcaagtacagtgaggtggctatcatctgcagattatact
ggcttaactaatcgccttggcaccattaacagttccctatcagatgatgctccgcctgaa
acagaacctcctgcagcacgatcacctttggtggagggaccaacagaaattaccagcagt
gatttccatgatagtattagatcagaaacttctgtagctgtgtcaccaacggaaattgct
tccccaagtactaggctgccaccaattccgtccttctcacagtttatcaacaccagaaag
acaaaagacaacagatcaagtgcatcagaaaagaaatcaccaaatggagttcagaagaac
ctagagaaaagaatgaggttgcagtag
DBGET
integrated database retrieval system
