Prunus mume (Japanese apricot): 103340676
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Entry
103340676 CDS
T03196
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103340676
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103340676
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103340676
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
103340676
NCBI-ProteinID:
XP_008242336
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Position
LG8:complement(13762147..13767801)
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AA seq
623 aa
AA seq
DB search
MANSNHRNSTAISIEDRNVEGESGNEGGAAKKGRSKWPAILFLPKWETVFAVSCALAVFL
DPVYPYIPVMKEGDDMCYYWDESLMWEFFVLRSALDLFYAMDIVIFWCQRNGNNAKAFGA
SSEKRETTVKGTILKLLPFLPRAYVALPFPQVIIIAGRYSSFNSFFLLMFFIPAQYILRV
YRTYGLLKRCPDMETGIGRWLKAILDFLPFVLAAHLFGALWYNLSLQRELDCWTLACRDK
RVGCDISGTGYYFYCGTAVDIATNLNTTHIIASCPLNPPDPTIFDFGIFLYGIQSNMTRS
TDLPPKLFQCFWWGLRNLSSIGSNLPTSIYMVEICFTVLVSISGIVLFLIYLNTRVQMSQ
QRSGQLKLIRKKQMMDPYIDLWLSRNDLSNSNLRMVIMKNVHQKLEENKEVDMENILSLL
PIIHQRFIMCLLSWNLLKRVPMLENMNIHVLKEICEHLKLVKYSEDNYIVREGEPLDKML
FITQGTAWSYPTSATGSSAIKCLVKGDFYGEELLNWASKLNSFSEFPTSTRNVKAHTKVE
AFAIKANSLNIVVSKFWWHFSKRLDHIEDSQLERWQSLAASSIQANWRRRMQGRAMGVPV
KKNISLKSILCCINVKNTNDLMP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactccaatcatcgtaactcaacagccataagtattgaagatcggaacgtagag
ggggaatctggtaatgaaggtggagcagccaaaaagggaagatcaaaatggccagcaata
ttattccttccaaagtgggagacagtatttgcggtatcatgtgcacttgctgtcttcctt
gatcctgtgtacccttacattcctgtcatgaaggagggggatgacatgtgctactattgg
gatgaaagcttgatgtgggaattttttgttttacgatcagccctagatctcttttatgca
atggacattgtcatcttctggtgtcagcggaatggtaataatgctaaggcatttggggcc
tcctcagaaaaaagggaaacaacagttaagggaaccatccttaagctgttaccctttcta
cctcgtgcgtatgttgctcttccctttccgcaggtaataattattgctggacgatattca
agctttaatagtttttttcttctaatgttcttcattccggcccaatatatactacgggtt
tatcgcacgtacggacttctcaagcggtgtcctgacatggaaactggaataggaagatgg
cttaaagcaatattggattttcttcccttcgtgcttgctgctcatctattcggagccttg
tggtacaatctttctcttcaacgagagctggattgttggacgcttgcctgtcgagataaa
agggtgggatgtgatatttctggaacaggttattatttctactgtggtaccgccgttgac
atcgccacgaatctcaataccacgcatataatcgcatcatgccctttaaatccaccagat
ccaaccatcttcgattttggtatatttctctacggtattcagtcgaacatgacaaggtca
acggatcttccaccaaagttgtttcaatgtttttggtgggggttacgaaatctgagttct
attggttcaaacctcccgaccagtatctatatggtggaaatctgttttacggttttggta
tctataagtggcatagtcctattcttaatatatctcaatacgagggtacagatgtcacaa
caaagatcaggtcagcttaaattgattcgaaagaagcagatgatggatccatatatagac
ttatggttgtctagaaatgacctttctaattcgaatttgaggatggtcatcatgaaaaac
gtacaccaaaaacttgaagaaaacaaagaagttgatatggagaatattctctctcttctt
cccattatacaccaaagatttatcatgtgccttctcagctggaatttacttaaaagagtg
ccaatgctggaaaatatgaatatacatgtgttgaaagaaatatgtgagcatcttaagtta
gtgaagtatagtgaagacaactatattgttcgagagggagaaccacttgataagatgctc
ttcatcacccaaggcaccgcatggtcatacccaaccagtgcaactggttcctcagcaata
aagtgtcttgtgaaaggtgatttctatggagaagagcttctaaattgggcatcaaaattg
aactctttttctgaatttcccacctcaaccagaaatgtcaaggctcatacgaaagttgaa
gcatttgccatcaaagccaacagcttgaacattgttgtctccaaattttggtggcatttt
agcaagaggcttgatcacatagaggactctcagttggagaggtggcaaagtttggcagct
tcttccatacaagcaaattggcgccgccgcatgcaaggccgagctatgggcgtacctgtg
aaaaaaaatattagcctaaaaagtatcttatgttgtatcaacgtcaaaaacacaaatgat
ctcatgccatga
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