Prunus mume (Japanese apricot): 103340683
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Entry
103340683 CDS
T03196
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03082
ATP-dependent chromatin remodeling
pmum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103340683
03083 Polycomb repressive complex
103340683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103340683
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103340683
Histone modification proteins
HAT complexes
HATB complex
103340683
HDAC complexes
Sin3A-HDAC complex
103340683
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103340683
PRC2.2
103340683
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103340683
Heterochromatin formation proteins
Other heterochromatin formation proteins
103340683
Chromatin remodeling factors
NuRD complex
103340683
NuRF complex
103340683
NuRF complex (fruit fly)
103340683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_SPT8
WD40_RFWD3
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
103340683
NCBI-ProteinID:
XP_008242343
UniProt:
A0ABM0PNZ7
LinkDB
All DBs
Position
LG8:complement(13853867..13859022)
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AA seq
502 aa
AA seq
DB search
MDAQSQQPQVGVVKKKETRGRKPKPKEEKKDDQQQQAKMKKAHQQATVDDKYTQWKSLVP
VLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPR
VAAAEHISQFNEEARSPFVKKYKTIIHPGEINRIRELPQNTKIVATHTDSPDVLIWDVEA
QPNRHAVLGATSSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKTVVLWSIQDHISAA
TTDPAATKSPGSGGSIIKQNSKPGDGNDKAADGPSVAPRGIYYGHEDTVEDVAFCPSSSQ
EFCSVGDDSCLILWDARVGSSPAIKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRLFD
RRNLTSGGVGAPIYKFEGHKAAVLCVQWCPDKSSVFGSSAEDGLLNIWDYEKVSKERTTK
GPSSPPGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCDTTGGGGTLQIWRMSDLIYRP
EEEVLAELEKFKSHVVSCASKP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcagtcgcagcagccacaagtcggagttgtgaagaagaaggagactcggggc
cgaaagcccaagcccaaggaagaaaagaaggacgaccagcaacagcaggccaagatgaag
aaggcccaccaacaagccaccgtcgacgacaagtacactcagtggaagtcactcgtccct
gtcctctacgactggctcgctaaccacaacctcgtctggccctccctctcttgccggtgg
ggtcctcagctcgagcaagctacttacaagaatcgccagcgtctctacctttctgagcag
actgatggaagtgttccaaatacgctggttattgcaaactgcgaggttgtcaaacctaga
gttgccgctgcagagcatatatctcagttcaatgaagaagcccgctcaccatttgttaag
aagtacaagactatcatacatccgggagagataaacagaatcagagaacttccacagaac
actaagatagtggccacacatacagacagccctgatgttctaatctgggatgtggaagct
caacctaaccgtcatgctgtccttggagccacaagctcacgcccggatttgattttgact
ggacatcaagataatgcagaatttgctcttgcaatgtgtccaactgaaccatatgtgctg
tctggagggaaggacaaaacagtggttttgtggagtattcaggaccatatatcagcggct
accacagatccagcagcaaccaaatctccaggatctggtgggtcaattattaaacaaaac
tcaaagcctggggatggtaatgataaagctgctgatggcccttctgttgcaccacgagga
atctactatgggcatgaggatacagttgaagatgtggcattttgcccatctagttcacag
gagttctgtagtgttggtgacgattcctgcctcatattatgggatgcacgtgtgggctct
agccctgccataaaggttgaaaaagcacataatgctgatcttcactgtgttgattggaat
ccccatgatgataaccttattctaacagggtcagcagataattccgttcgcttgtttgat
cgccgaaatctcacttctggcggagttggggcacctatttataaatttgagggtcacaaa
gcagctgttctttgtgtccagtggtgtccagacaaatcgtctgtctttggaagctctgca
gaagatggtcttttaaacatttgggattatgagaaggtaagtaaggagcgaactaccaaa
ggcccaagttctccacctggtctgtttttccagcatgctgggcacagggacaaagttgtt
gatttccattggaatgcatccgatccatggaccatcgttagtgtgtctgatgactgtgat
actactggtggaggggggacattgcagatatggcgaatgagtgacctgatctacagacct
gaagaggaggttctggcagagcttgagaagttcaagtcccatgtcgtttcctgtgcttca
aagccttga
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integrated database retrieval system
