Prunus mume (Japanese apricot): 103340686
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Entry
103340686 CDS
T03196
Name
(RefSeq) zinc finger CCCH domain-containing protein 64
KO
K24939
CWF19-like protein 1
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103340686
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103340686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
zf-CCCH_10
zf-CCCH_9
DUF2498
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
103340686
NCBI-ProteinID:
XP_008242348
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All DBs
Position
LG8:complement(13874521..13878302)
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AA seq
607 aa
AA seq
DB search
MAPPKILLCGDVLGHLKQLFKRVASVNKSAGPFDALFCVGQFFPDSADQLDEFNDYIEGR
AQIPLPTYFIGDYGVAATKVLLAATKDSGNQGFKLDGLKICNNLYWLKGSGKFKLHGLSV
AYLSGLQCSDGQQFGTYSQDDVDVLRAVAEEPGIIDLFLTNKWPSGITNRAAASDVPPGA
SEPFGSDSTVAELVAEIKPRYHIAGTKGVYYAREPYSNVDAVHVTRFLGLAPVGNKDKQK
FIHAISPTPASTMSTVEISTKSPTTTLSPYTYGEKTDHATEAGKRSSDSISDSQYWRYDV
NQKRQKHGAGDGNRLCFKFVSSGSCPRGENCNFQHDVDAREQSLRGVCFDFMNKGKCERG
PDCKFKHSLQAEGESNSHQRRGSGNANSNRSTECWFCLSSPKVESHLIISIGEHYYCALA
KGPLVEDHVLLIPIGHLPNTLSLPAECEIELGKFQDALKQYYKKQGKDVVFFEWASKRTT
HANLQAVPVPSAKSAAVQNIFNLAAEKLSFKFETMKSGNNSDGRKMLRTQFDRNFSFFYV
QLPDGTILSHSIEENERFLPQFGREVIAGLLNKADRADWRNCTDSKEEEAKMAGDFKSGF
EEFDPNK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccgaaaattttactctgcggcgacgttttgggccacctcaagcagctcttt
aaacgagtcgcttcggtcaacaaatcagcgggtccgttcgacgctttgttctgcgtgggc
cagttcttccccgactcggcggaccagctcgacgagttcaatgactacattgaaggccgg
gcacaaattcctctcccaacctacttcatcggagactatggcgttgccgccactaaggta
ctcttagccgcaacgaaagattccgggaaccaaggcttcaaattggacggcttgaagata
tgcaacaatctctactggttgaaaggcagtggcaaatttaagctccatgggttatctgtg
gcgtatttatctggtctccaatgttcggatggtcaacagtttgggacatatagccaggat
gatgttgatgtgttgcgagcggttgctgaggagcctggaattattgacttgtttctaact
aacaaatggccaagcgggatcactaatagggcagctgcatccgatgttcctcctggagcc
tctgagccttttggcagtgactctactgtggcagagttagtagccgagatcaaaccgcgc
tatcatattgcaggtacgaaaggcgtgtactatgcacgtgaaccttactccaatgtcgat
gctgtgcatgtgacccgcttcttgggccttgctccggttggaaacaaagataagcagaaa
tttattcatgcaatttctcctactccagcatccacaatgtctactgttgagattagtaca
aagtcaccaaccactaccttatctccatacacatatggggagaaaacagatcatgcaaca
gaagctggaaagaggtctagcgatagcatttctgattcacagtactggagatatgatgtc
aaccaaaaaaggcagaaacatggagctggggatggtaataggctgtgttttaagtttgta
tcctctggctcttgtcctcgaggggaaaattgcaactttcagcatgatgtagatgcaaga
gaacaatctttgaggggtgtttgtttcgattttatgaacaaaggaaaatgtgaaaggggt
ccagattgcaaatttaagcacagcttacaggctgaaggtgagagcaattctcaccagaga
cgtggatctggaaatgccaacagtaacaggtcaacagagtgctggttttgtttgtcaagc
cccaaagtagaatcacatctaattatcagcataggggagcattactattgtgcccttgct
aaaggtccgcttgttgaagaccacgtattgctaattcctataggccatttacccaacacc
ctttctttacccgcagaatgcgaaattgagcttggtaaattccaggatgctctaaagcag
tattataaaaaacaagggaaggacgttgttttctttgagtgggcttcgaaacgtacaact
catgctaatcttcaggccgttcctgttccatcagccaaatcagctgctgttcaaaatata
tttaacttagctgcagaaaagttgagcttcaagtttgagactatgaaatctggtaacaat
tctgatgggaggaaaatgttaaggacgcaattcgacagaaatttcagtttcttctatgtt
cagctccctgatggtacaatcctgtctcattcaattgaggagaatgagagattcctaccc
caatttggacgcgaggttatagcaggtttgttgaacaaggctgacagggctgattggagg
aattgtacagatagcaaagaagaggaagccaagatggcgggagatttcaagagtggattt
gaagaatttgatccaaataagtaa
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