Prunus mume (Japanese apricot): 103340838
Help
Entry
103340838 CDS
T03196
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103340838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103340838
Spliceosome [BR:
pmum03041
]
Complex B
Other components
Prp19-related factors
103340838
Complex C
103340838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
PRF
Motif
Other DBs
NCBI-GeneID:
103340838
NCBI-ProteinID:
XP_008242515
LinkDB
All DBs
Position
LG8:complement(14710362..14712429)
Genome browser
AA seq
610 aa
AA seq
DB search
MTALKGLLPPPAATTTASYDHSNDPWFKQRFGSAEAQRSAAVVKPMPVPPYLKRQGFVPR
KVEEFGDGGAFPEIHIAQYPLGMGRDKLSKPGTNILPVTVNARGNVSYDAIVKQNENSKK
LVYSQHKDLVPKFLKNEDEEMDDANEKEEELQKEIEETTAETKAALEKIVNARLSTAQPK
NIAKQSTGSKIIKYTPSQKAAAFNSGAKARIIRMAEMPVDPLEPPKFKHKRVPRPSGSPP
VPVMHSPPRPVTVKDLNDWKIPPCISIWKNQKGYTIPLDKRLAAEGKVLQDLGGLFLDNY
AKLQEALYVAEQKAREGIAMRKKVQEEMLTKEKEKKEQDLRILAQRARSERMGAAAPPSM
PSNRTALDNDARGDYERPTSEKETDYPKETREEREGRLKREKIREERRRERERERRLEPK
DAPMGKKSKITRDRDRDISEKVALGMASDGASRGGEVMYDQRLFNQEKGMESGFATDDQY
NVYDKGLSTAPPTLSTLYRPKKDVDNEMYGGADEQLDKIKKTDRFKPDKGFGGAAERAGP
RGRPVEFEKDAAEEADPFGLDRFLTEVKQSAKATEKVGTGGTMRASAGSSMRDGYQGGSS
RTRIGFERGR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgacggctttgaaagggcttcttccacctccggcagcaaccacaacggcttcttacgac
cactcgaatgatccgtggttcaagcagcgcttcggttctgctgaggcacaaagatctgct
gctgtcgtcaagccaatgcctgtacctccttacttgaagcgtcaaggctttgttcctagg
aaggtggaggagtttggggatgggggtgctttccctgagattcatatagctcagtaccct
cttggcatgggcagggacaagttgtccaaacccggtacgaacatacttccggttacagtt
aatgccagggggaatgtcagctatgatgccattgttaagcagaacgagaactcgaaaaaa
cttgtctactcacagcacaaggatcttgtgccaaaatttttgaagaacgaggatgaggag
atggatgatgcgaatgagaaagaggaggagttgcagaaggagattgaagaaacaacagca
gaaacaaaagctgcgcttgagaagattgtgaatgcgagattgagcactgcacagccgaaa
aatattgccaagcagtcgactggctcgaaaattatcaagtacacgccatcgcagaaggca
gcggcgtttaactctggtgccaaggcgaggattatcaggatggcggagatgcctgtggac
ccacttgagcctcctaagttcaagcataagcgtgttccgaggccttctgggtccccgccc
gtgccggtcatgcattccccgccacggccggtgactgtgaaagacctgaacgattggaag
attccaccttgtatttcaatttggaagaatcagaaagggtatacgataccactggacaaa
cgtcttgcagctgaggggaaagtccttcaagatcttggtggtctgtttcttgataattac
gcaaagcttcaagaggctttgtatgtagcagagcagaaggctagagagggaattgctatg
agaaaaaaagttcaggaggaaatgttgacgaaggagaaggaaaagaaagagcaggacttg
aggatattagctcagagggctcgttccgagagaatgggtgctgcagcccctccttcaatg
ccttctaacagaacagcactggacaatgatgcgagaggggattatgagcgtccaacaagc
gaaaaagagactgattatccgaaggagactagagaggaaagagaagggaggttgaagcgg
gagaagatccgtgaggagcgacgaagagaaagggaaagggagagaaggttggagcccaaa
gatgcaccaatggggaagaaaagtaaaattacaagagatcgagatcgggatatcagtgag
aaagttgccctcggcatggcttctgatggagcaagcagagggggagaggttatgtatgac
cagaggctgttcaaccaggagaaaggaatggaatctgggtttgccactgatgaccagtac
aacgtttatgacaagggcttgtccactgctccgcctacgctctcaaccttgtacaggcct
aagaaggatgttgataatgaaatgtacggaggtgctgatgagcagttggataagattaag
aaaaccgatcgcttcaaacctgacaaaggatttggaggagctgctgagagggcaggtcca
agagggcgaccggtcgagtttgagaaagatgctgctgaagaagccgatccatttggtctc
gaccggttcttgacagaggtgaaacagagcgcaaaagccacggaaaaggttggaacagga
gggacaatgagagcaagtgcagggtcttccatgcgagatggctaccaagggggctccagc
agaacccgtattggattcgaaaggggtcgctaa
DBGET
integrated database retrieval system
