Prunus mume (Japanese apricot): 103340913
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Entry
103340913 CDS
T03196
Name
(RefSeq) coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103340913
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103340913
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103340913
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103340913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
NBCH_WD40
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
TPR_GEMI5
Beta-prop_DCAF12
DUF6464
Motif
Other DBs
NCBI-GeneID:
103340913
NCBI-ProteinID:
XP_008242602
UniProt:
A0ABM0PPL5
LinkDB
All DBs
Position
LG8:complement(15024930..15033942)
Genome browser
AA seq
877 aa
AA seq
DB search
MPLRLDIKRKFVQRTERVKSLDLHPTEPWILASLYSGTVFIFNYQSQSMAKSFEVSELPV
RSAKFVARKQWVVAAADDMFIRAYNYNTMDKVKVFEAHSDYIRCVAVHPTLPCVLSSSDD
MLIKLWDWEKGWMCTQIFEGHCHYVMQVTFNPKDTNTFASASLDHTVKIWNLASPDPNFT
LDAHVKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKTCVQTLEGHTHNVSAVCFHPE
LPVIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAFGYMKGSRRIVIGYDEGAIMVKIG
REVPVASMDSGGKIIWAKHNEIQTVNIKSVGADFEVADGERLPLAVKELGTCDLYPQSLQ
HNPNGRFVVVCGDGEYIIYTGLAWRNRSFGSALEFVWSSDGEYAVRESTSRIKIFSKAFQ
EKKNVRPTFSVEHIYGGVLLAMRSNDFVCFYDWVECRLIRRIDVNVKNVYWADSGDLVAI
SSDSSFYVLKYNRDIVSSYFDSGRPVDELGVEDAFELLFEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSCLYLIDKEFNVMGYTLLLSLIEYKTLII
RGDLERAKQIFPTIPPEQHNSVARFLESRGMLEDALVVATDADYKFDLAIQLGRLEIAME
IAKEAQSESKWKRLGELAMSTGKLEMAEDCLSHGKDFSGLLLLYSSLGDAQGILKLASLA
KEQGKNNVAFLCLFMLGKVEECIQLLLESERIPEAALMARSYLPSKVSEIVSIWRNDLNK
VNKRAAESLADPQEYPNLFEDWQVSLALESKSAENSGIHLRSQRLVLLKGSEACKLMKKP
HLKMEIWIKRRDRRMEKIKMKVRLLRRKMIQRMVLFL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggcttgatatcaagagaaaatttgtgcaaagaaccgagagagttaagtct
ttggatctgcatccaactgagccatggatccttgcaagtctgtattcaggaaccgtgttt
atcttcaattaccagtcacagagcatggcaaagtcttttgaagtctctgaattgccagtt
cggtcagcaaaatttgtagcccgtaagcagtgggtagtagctgcagctgatgacatgttc
atacgtgcatacaattataatacaatggataaggttaaagtgtttgaagcacactcagac
tatattagatgtgtggctgtccatccaacacttccatgtgttttgtcatcatccgatgac
atgcttatcaaactgtgggattgggaaaaaggttggatgtgtactcagatattcgaaggg
cattgccactatgtgatgcaagtgacctttaatcctaaagacaccaatacttttgcaagt
gcttccctggatcacactgtaaagatctggaatcttgcctcccctgaccccaattttacg
ttggatgcccacgtgaaaggggtaaattgcgttgattacttcactggcggtgataaacct
tacttaatcacgggctcagatgatcatactgcaaaggtgtgggactatcagacaaaaact
tgtgttcagacacttgaagggcatactcacaatgtatctgcagtatgctttcatccggaa
cttccagttataattactggttctgaggatggaactgttagaatatggcactcaacgact
tatcggcttgaaaacacactgaattatgggcttgaacgtgtttgggcctttgggtatatg
aaaggttcacgtcggattgtaattggttatgatgaaggagccataatggtaaaaattggc
cgagaagtaccagttgctagcatggatagtggtgggaaaattatttgggctaagcataat
gaaattcaaactgtgaatatcaagagcgttggagcagattttgaggttgcagatggagaa
agattgcctttggccgtgaaggagttgggaacctgtgacctttatcctcaaagtttgcag
cacaacccgaatggaaggtttgttgttgtttgtggagatggtgagtacataatatacaca
ggtctagcatggagaaatagatcctttggctcagcattggaatttgtctggtcatctgat
ggagaatatgctgttagggaatctacttcaaggataaaaattttcagcaaagcattccag
gaaaagaagaatgttcgaccaacattttctgtagaacacatttatggaggggtcttactg
gcaatgcgctcaaatgactttgtatgcttctatgactgggtggaatgcagattgattaga
cgaattgatgtcaatgtcaagaatgtttattgggctgatagcggtgatttggtggcaatt
tctagtgattcatcattttacgttctaaaatacaatagggatatagtctcatcgtatttt
gacagtggaaggcctgttgatgaactaggtgttgaggatgcctttgagctcctctttgaa
ataaacgagcgtgtcagaactggattatgggttggggactgtttcatttacaataactca
tcttggcgactaaattattgtgttggtggtgaggtaaccacaatgtttcacctagaccgg
cccatgtacttgttgggctatcttgccaatcaaagttgtctttatctaattgataaagag
tttaatgtcatgggatacaccttgcttctcagcttgatcgagtacaaaacacttattata
cgtggagatttagagcgtgcaaaacaaatttttccaacaatacctccagagcaacataat
agtgtggctcgttttttggaatctcgaggtatgttggaggatgcactggtagtggctaca
gatgctgactacaaatttgatcttgccatacagctgggtagacttgagattgcaatggaa
attgctaaagaagcgcaaagtgaatccaagtggaagcggctgggagaattagctatgtcc
actgggaagcttgaaatggctgaagattgtctatcacatggaaaagacttttctggcttg
ttgcttctttattcttctcttggagatgctcaaggaatattaaaactcgcatcccttgcc
aaagagcaaggaaagaataatgttgctttcctttgcttatttatgctgggtaaagtggaa
gaatgcatccagctgttgctggaaagtgaacggatacctgaagcagctttgatggcacga
tcttacctccccagcaaggtctcagagatagtttcaatttggagaaatgacctgaacaag
gtcaataaaagagctgcagaatcattggcggatccgcaagagtatcctaatttgtttgag
gactggcaagtttctcttgcccttgagtctaaaagtgcagaaaatagcggcattcatctg
agaagtcaacgactagtcttgttgaaaggttcagaagcatgcaagttgatgaagaagccc
catttgaaaatggagatctggatcaagaggagggacaggagaatggagaaaatcaagatg
aaggtgagactgttgaggaggaagatgattcaacgaatggtgttgttcttgtaa
DBGET
integrated database retrieval system
