Prunus mume (Japanese apricot): 103341108
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Entry
103341108 CDS
T03196
Name
(RefSeq) TBC1 domain family member 15
KO
K20168
TBC1 domain family member 15
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103341108
Membrane trafficking [BR:
pmum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103341108
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
Viral_NABP
Motif
Other DBs
NCBI-GeneID:
103341108
NCBI-ProteinID:
XP_008242808
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All DBs
Position
LG8:complement(16004472..16010428)
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AA seq
661 aa
AA seq
DB search
MQEPELHDLSDDADYAASQQHGSASMMRSDSGKHSSSSEHDGAEVVYLKDNVTIHPTQFA
SERISGRLRLIKQGSSLFMTWIPYKGQNSNARLTERDRNLYTIRAVPLTEVRSIRRHTPA
LGWQYIIVVLSTGLAFPPLYFYNGGVKEFLATIKQHVFIVRSADDANVFLVNDFQNPLQR
TLSSLELPRALSVASGQSTSVSVGETSSDENQERTSGDVYEGSISSAQYNERQRQRVHDP
ARDLSIQVLEKFSLVTKFARETTSQLFRDNHSNGYGAIERRSNNLSPIDYPQKASNDSNK
VPDKSPVPPDSLEFDKVSLVWGKPRQAPLGSDEWKTFLDYEGRIMDSEALRKRIFYGGVE
HELRKEVWPFLLGYHAYDSTEAERLYLRAVKKSEFETIKKQWQSISPEQAKRFTKFRERK
GLIEKDVVRTDRSLSFYDGDDNPNVNLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVME
DESDTFWCFVSLMERLGPNFNRDQNGMHSQLFAITKLVELLDIPLHNHFTQHDCLNYFFC
FRWVLIQFKREFEFDKTMRLWEVLWAHYPSEHLHLYVCVAILKRHRSKIIGEQMDFDTLL
KFINELSGHIDLDAVVRDAEALCICAGENGAACIPPGTPPSLPVDDYGLLLYPQQELDDV
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacccgagcttcacgatctctccgacgacgccgattacgctgcgtcacagcaa
cacggctcggcaagcatgatgcgaagcgatagtgggaaacacagctcgtcgagcgagcac
gatggcgccgaggtggtttacttgaaagataatgttaccatccacccaactcagtttgcc
tcggagaggattagtggaagattaaggctaatcaagcaaggctcttctctattcatgaca
tggattccatacaaagggcaaaactcgaatgctaggctgactgagagagataggaatctt
tataccataagagcagtgccattaacggaggttcggtccattcgtcgccacactccggcg
cttggatggcagtacattattgtcgttttgtctacaggacttgcgtttcctcctctgtac
ttctacaatggaggagtcaaagagtttcttgctacaataaagcaacatgtttttattgtg
aggtcagctgatgatgcaaatgtatttctggttaatgattttcaaaatcctctccagaga
actctatcatctttggagttgcctagggctctttctgttgcaagtggacaatctacatct
gtctcagttggcgagacctcttcggatgaaaaccaggagagaacaagtggggatgtttat
gaaggaagtataagcagtgctcaatacaacgagaggcaaagacaaagggttcatgatcct
gcacgagatctttcaattcaagtgttggagaagttctctcttgtgaccaaatttgctcgg
gaaacaacttcacaactcttccgtgataatcatagtaatggatatggtgctatagaaagg
agaagtaataacctgtcccccattgattatcctcagaaggcatctaatgattcaaacaaa
gtccccgataaaagtcctgttcccccagattcactggagtttgataaagtatcactggta
tggggaaaaccacggcaggcacctttgggctctgatgagtggaaaaccttcttggattat
gaagggaggatcatggactctgaagctttacgaaagagaatattttatgggggagttgag
catgaattacgaaaagaggtctggccgttcttgttgggataccatgcatatgattcaaca
gaggctgagaggttataccttagggccgttaagaagtcagagtttgagaccataaagaag
caatggcagagtatctccccagagcaggccaaacgatttacaaaattcagggagagaaaa
ggcctgattgagaaagatgtggtaaggactgacagatctctctccttctatgatggtgac
gataatccaaatgtgaacctgttacgtgatatactgttaacatactcattttacaacttt
gatcttggttactgtcagggcatgagtgatcttctgtccccaatattgtttgtaatggag
gatgagtcagacacattttggtgttttgtttcactgatggagcgtcttgggcccaatttt
aaccgggaccaaaatggcatgcactctcaactttttgcaataactaagttggtggagttg
ttagacattccgctgcacaatcactttacacagcatgactgcttgaattacttcttttgt
ttccgctgggttctgatacaatttaaaagggagtttgaattcgacaaaacaatgcggttg
tgggaggtattgtgggcacattatccgtctgagcacctgcacctgtatgtgtgtgttgct
atattgaagcgacaccgtagtaagataatcggggagcagatggactttgacactctattg
aagttcattaatgagctgagtggtcatatagatcttgatgcagttgtgagggatgcggag
gctctgtgtatatgtgctggtgagaatggtgctgcgtgcattcctcctggaactccaccc
tcattgcctgttgatgattatggtttattattgtatccgcaacaggaactagacgacgtt
ttgtaa
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