Prunus mume (Japanese apricot): 103341177
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Entry
103341177 CDS
T03196
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00531
Glycosaminoglycan degradation
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
103341177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmum00536
]
103341177
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
103341177
Glycosaminoglycan binding proteins [BR:
pmum00536
]
Heparan sulfate / Heparin
Enzymes
103341177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
103341177
NCBI-ProteinID:
XP_008242878
UniProt:
A0ABM0PQ98
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All DBs
Position
LG8:complement(16252414..16255339)
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AA seq
542 aa
AA seq
DB search
MGSHFWPMGLCFWVCFSAFSFIHSVNSQGFGGGSIEGTVHVNGKDAIGKIDDDFICATLD
WWPPEKCDYGTCSWGRASFLNLNLGSSILLNAVKAFSPLKLRLGGTLQDKVIYATPDNKQ
RCVPFQKSTTEMFGFTPGCLPMNRWDELNSFFQKSGAKLIFGLNALTGRTIHSNGTATGA
WDYKNSESFIRYSVKKNYTVHGWELGNELCGHGIGTTIGASQYVSDTASLQKIIHDIYKG
IEPKPLILSPGGFFDAKWFKDYTDKTTTSLDVVTHHIYNLGPGVDEHLIEKILDPSYLDG
IASTFSNLRNILKSSSTSAAAWVGEAGGAYNSGRHLVSNSFVYSFWYLDQLAMSAAYDTK
TYCRQTLIGGNYGLLNTTTYEPNPDYYSALLWHRLMGRNVLATSFSGPKKIRAYAHCAKQ
SKGITVLLINLQNTTTVEARVAFNTSWTLRHKHKSHRSHRAQLKFHQGLRSETVREEYHL
TAKDGNLQSQTMLLNGNALTLNSSGIIPNLDPVYVNSSEPILVGPSSIVFAHIPYVVLPA
CR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcatttctggccaatggggttgtgtttctgggtctgtttctcggctttcagc
ttcattcattctgtaaattcacagggcttcggaggtggaagtattgaaggcactgtccac
gttaatggcaaagatgccattggtaaaattgatgatgattttatttgtgcaactttggat
tggtggcctcctgagaaatgtgactatgggacatgcagctggggtcgtgcttctttcctc
aatctgaatctaggcagcagtatcttattaaatgccgtgaaggctttctcacccttgaaa
cttagattggggggtaccttgcaagataaggtcatctatgctacaccagacaataagcaa
cgctgtgttccttttcaaaaaagcaccacagagatgtttggttttactccggggtgctta
ccaatgaacagatgggatgaattaaactccttttttcagaaatctggggccaagcttatc
tttggattaaatgctctcactggacgaacaatacattctaatggtactgcaactggagct
tgggactacaaaaattctgagtctttcatccgttacagtgttaaaaagaactacacagta
catggttgggagcttgggaatgaattgtgtggacatggaattggaacaacaatcggagcg
agtcaatacgtctctgatacagcttctctgcaaaagataatacacgatatatacaagggt
attgaaccaaagccactaatcctatcacctggaggattctttgatgcaaagtggttcaaa
gactatacagataaaacaaccacatccttggacgtggtcacccaccatatatataatcta
gggccaggggttgatgaacaccttattgaaaagattcttgatccctcctatctcgacggt
attgctagcacatttagcaacctccgtaacatcctaaagagttcctcaacttcagcagct
gcatgggttggggaagcaggaggtgcttacaacagcggccgtcatcttgtcagcaattca
tttgtatatagtttctggtatttagatcagcttgccatgtcagcagcttatgataccaaa
acgtactgtagacagacattgattggtggaaactatggtttactcaacactactacctac
gaacccaatccagactactacagtgctcttctttggcaccgattgatgggaagaaatgta
ctggcaaccagcttttctggaccgaaaaagatacgtgcttacgcacactgtgcaaaacaa
tccaaagggattacagtactactgatcaacctacaaaacacgacgacggtggaggcaaga
gttgccttcaacacttcctggactttgcgacataaacacaaatctcacaggtctcataga
gcacagctgaagttccatcagggtttgagaagtgaaacagtacgagaagaataccatcta
acagcaaaggatggaaatttacaaagccaaaccatgctgctaaatggaaacgctttgacc
ttaaattcatctgggatcatacctaacttagaccctgtatatgtaaattcatcagaacca
attttggttggtccatcttcaattgtatttgctcacataccatatgttgttctgcctgct
tgcaggtag
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