Prunus mume (Japanese apricot): 103341224
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Entry
103341224 CDS
T03196
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103341224
03036 Chromosome and associated proteins [BR:
pmum03036
]
103341224
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103341224
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103341224
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103341224
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
103341224
DSBR (double strand breaks repair)
Other DSBR factors
Others
103341224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
103341224
NCBI-ProteinID:
XP_008242929
LinkDB
All DBs
Position
LG8:complement(16527036..16530166)
Genome browser
AA seq
530 aa
AA seq
DB search
MASPELTDYERKRLENIRRNDQMMASLKLHSIAAQVSASTKRPRAETKSYKVCPKKQPKT
QTPIVIRRSLRTRGLPPDGKGLSDDAIESMVRTSKSPSPSKASPRDLGPLSMRDAYSGAS
DRALIEALLGIANKPQLSASVKGEIGRFEVSKVENSSGAREGIDGLTYGLIKKEENEIED
GLKLEPLSEGIDGITCGLVKKEESEVDSGLKLESLTLNSENIARVVPGRITNVSFFPCTS
SSMVVVGNKFGNVGFWHIDSKEEEESGVYLYRPHTGPISGILIQQHCTSKIFTSCYDGFI
RLMDAEKEVFDLVYSSEETIYSICQQSKDPKCLYFAEGHGGLSVWDERTGNFSNQWSLHE
DRINSINFNSENSNVMTTSSTDGTACIWDLRSINANKLKTLRTVGHKRAVHSAYFSPSGR
SLVTTSIDNTVGISSGVNFEDISMIYHDNRTGRWISSFRAIWGWDDEYVFIGNMKRGVDV
ISPVERRTVFTLQSPHMSAIPCRFDVHPFNVGMLAGATSGGQVYIWTLGC
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctccggaactcacagactatgagcggaagaggctcgagaacattcgccgaaat
gaccaaatgatggcttccctcaagctccattccatcgctgcccaagtctctgcctcaacc
aaacgcccaagggctgagaccaaatcgtacaaagtatgtccgaagaagcaacccaaaacc
cagaccccaattgttataaggcgttctttacgtacaagaggtttacctcccgatggcaag
ggccttagcgatgatgctatcgaatccatggtcaggacctcaaaatctccgagcccatcg
aaagcatcgcctcgcgacttgggtcctcttagtatgagagatgcgtatagtggagcgtcg
gatcgagctctaattgaagcccttttgggtattgcgaacaaaccccaactgagtgcttca
gttaaaggggaaattgggagatttgaggtttccaaagttgagaattcgagcggtgcccgt
gagggaatagacgggcttacttatggtttgattaagaaggaagagaatgaaattgaggat
ggtttgaagttggagcctttgagtgagggcatagatgggataacttgcggtttggttaag
aaggaagagagtgaagttgatagtggtttaaagttggagtctttgactctgaattcggag
aatatagcgcgggttgtgccagggagaattacgaacgtgagtttttttccttgtactagt
tcaagtatggttgtggttgggaataagtttgggaatgttggattttggcatattgattct
aaggaagaggaagaaagtggggtctacttgtatcgtccacatacaggtcccatttcaggg
attttgattcaacaacattgcacgtcaaagatctttaccagttgttatgatggatttatc
cggttgatggatgctgagaaagaggtgtttgatctagtatattccagtgaagagactata
tactccatctgccaacaatcaaaggatccaaaatgcttatattttgctgagggtcatgga
ggtttaagtgtctgggatgagagaacaggaaacttctcaaaccagtggtctttgcatgaa
gacagaattaattccataaactttaactcagaaaactctaacgtcatgactactagttcc
acagatggaacagcctgcatctgggatttgagaagtattaatgcaaataaactcaaaact
ttaagaacagttggccacaaaagggctgtgcattctgcttacttctcgccgtctggaagg
tctctagtgacgacaagtattgacaacacagttggtatatcaagtggagttaattttgag
gacatatcaatgatataccatgataatcgtactggtagatggatttcttcgttcagggca
atatggggctgggacgatgaatatgtcttcattggcaatatgaaaagaggcgtggatgtt
atctccccagttgaaagaagaacagttttcactttacagagcccacacatgtctgcaatt
ccatgtagatttgatgttcaccctttcaatgttgggatgctagcaggagccacaagtgga
ggccaagtttacatatggacattgggctgctag
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integrated database retrieval system
