Prunus mume (Japanese apricot): 103341256
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Entry
103341256 CDS
T03196
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103341256
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103341256
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103341256
Protein phosphatases and associated proteins [BR:
pmum01009
]
HAD phosphatases
Fcp/Scp phosphatases
103341256
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103341256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
BRCT_2
ASFV_p27
Motif
Other DBs
NCBI-GeneID:
103341256
NCBI-ProteinID:
XP_008242970
UniProt:
A0ABM0PQI1
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All DBs
Position
LG8:complement(16693436..16698211)
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AA seq
449 aa
AA seq
DB search
MSLAESPVHSSSSDDFTGFLERALGSGSSHSSPDEEADYESDDGSERSTKRRKVENLGSI
DKTHGSTSQVFVEENSEASPKTDICTHPGSVKDLCIVCGQRVDEKSGVPLGYIHKDFWLN
NDEIDRVRSTDIKKSLHLKKLYLVLDLDHTLLNSTHLNHMTAEEEYLHSQTDSLQDVSNG
SLFRVDVMHMMTKLRPFVRKFLKEASEMFEMYIYTMGERAYALEMAKLLDPRKEYFGDRV
ISRDDGTQKHQKGLDVVLGQESAALILDDTENAWTKHKDNLILMERYHFFRSSCHQFGFH
CKSLSELKSDESEPEGALATVLEVLKRTHNMFFYESKDNLIDRDVRQVLKTLRKEILKGC
KIVFSRVFPSKFQAENHQLWKMAEQLGAACSTELDPSVTHVVSTDAGTEKSRWAVKEKKF
LVHPQWIEASNYMWLKQAEDKFPVKQTKT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgccgaatctccggtacattcgtctagcagtgatgactttactgggtttctt
gagagagcactgggttctggttcttcgcattcctcaccagatgaagaagctgattatgag
agcgatgatggaagtgagaggagtacaaaaaggcgcaaggtagagaatcttggaagcata
gacaaaactcatgggtccacttcacaagtatttgtagaagaaaactcagaagcatcccca
aagacggatatctgcactcatcccggttcagtaaaagatttgtgtatagtttgtggccag
agggtggatgagaagtctggtgttccacttgggtacatacacaaggacttctggcttaat
aatgatgaaattgaccgggtacgcagcacagacattaagaaatcgttacaccttaagaaa
ctttacttggtacttgatctagatcacacgctgctaaattccacccatctgaatcatatg
acggcagaagaagaatatttacacagccaaactgattctctgcaagatgtttcaaacggt
agcctcttcagagtggacgttatgcatatgatgaccaagttgaggccctttgttaggaaa
tttttaaaggaggccagcgaaatgttcgagatgtacatatacacaatgggtgaacgagcc
tatgcactggaaatggctaaactgcttgatcccaggaaagagtacttcggtgatagagtg
atatcacgtgatgatggcacccaaaaacatcaaaagggtctagatgttgtgcttggccag
gaaagtgctgctttgatccttgatgataccgaaaatgcatggacaaagcacaaggacaat
ttaatattgatggaaagatatcatttctttagatcgagttgtcaccaatttgggttccat
tgcaagtctctttcagagttgaagagtgatgaaagtgagcctgaaggagctcttgcaact
gttcttgaagttcttaagcgaacccacaatatgttcttttatgaatcgaaggacaatctt
attgacagagatgtgaggcaggtgttgaaaactcttcggaaggaaatcttaaaggggtgt
aaaattgttttcagccgtgtttttccttcaaaattccaggccgagaatcatcagctgtgg
aagatggcagagcagttgggagccgcttgttcaacagaattggacccgtcagtgacacat
gtggtttcaacagacgctggaacagagaagtctcgttgggcagtgaaagagaagaagttt
ttggtccatccacagtggattgaagcttcaaattatatgtggttaaagcaagctgaagac
aagttccctgtcaagcaaacgaaaacgtaa
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