KEGG   Prunus mume (Japanese apricot): 103341305
Entry
103341305         CDS       T03196                                 
Name
(RefSeq) uncharacterized protein LOC103341305
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03022  Basal transcription factors
pmum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103341305
  09124 Replication and repair
   03420 Nucleotide excision repair
    103341305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmum03021]
    103341305
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103341305
Transcription machinery [BR:pmum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103341305
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103341305
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 103341305
NCBI-ProteinID: XP_008243033
LinkDB
Position
LG8:complement(16939024..16942074)
AA seq 191 aa
MVVTSSNPHNKEIVVRKRIASIFNKREEDFPSLKEYNDYLEEVEDMTFNLIDGIDVPAIE
AKIAKYQEENAEQIMINRARKAEELAAALAASKGHPAQNDTDVALSQGSQAGFGTGTQGQ
YAPTVAGQPRPTGMGPQPLPLGGGHDMHGYAVDDEEMIKLRAERGGRAGGWSVEISRKRA
LEEAFNSIWVS
NT seq 576 nt   +upstreamnt  +downstreamnt
atggtggttaccagttctaatccccacaacaaggagattgttgtcaggaagaggattgcg
agcatattcaataaacgggaagaggattttccgtccttgaaagaatacaatgattacttg
gaggaagtggaggacatgacatttaacttgatcgatggaatagatgtccctgctattgaa
gcaaaaattgcaaagtatcaggaagaaaatgctgaacaaataatgattaatagagcccgt
aaggctgaagagcttgctgcagctctagcagcaagcaagggacatcctgcacagaatgat
actgatgtggctctgagccaaggctctcaagcaggatttggtactggtacacaggggcag
tatgcccctacagttgcaggacaaccacgaccaactggcatgggtccacaaccactacca
cttggaggggggcatgatatgcatggatatgctgttgacgatgaagaaatgataaagctc
cgagcagagagaggtggtagggcaggagggtggagtgtagagataagcaggaagagggca
ctcgaagaagccttcaatagcatttgggtttcgtag

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