Prunus mume (Japanese apricot): 103341334
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Entry
103341334 CDS
T03196
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103341334
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103341334
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
103341334
NCBI-ProteinID:
XP_008243062
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Position
LG8:complement(17089365..17091625)
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AA seq
394 aa
AA seq
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MANPKTLLPLLLLSQLVLMMGGAHAAVLTYSVTSLGAIADGKTDSTKAFLSAWSKACASV
QPAVIYVPSGRFLLRNAAFSGPCKNNAITFRIDGTLVAPSDYRVIGNEPNWILFEHVNGV
TISGGLLDGQGTGLWACKASTKSCPSGATTLGFSSSNNIVVNGLASLNSQMFHIVINGCQ
NVKMQGVKVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSVGPGTTNLWIENVACG
PGHGISIGSLGKEPQEDGVQNVTVKTVTFTGTQNGVRIKSWGRPSTGFARNILFQHVVNV
NVQNPIVIDQNYCPGNKDCPGQVSGVKISDVIYQDIHGTSATQVAVKFDCSSKYPCSGIK
LEDVKLTYKDQAAEASCKYAGGTATGTVQPTSCL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccccaaaaccctcctccccctcctccttctctcacaactagtcttgatgatg
ggcggtgcgcatgctgcagtcctaacctacagcgtgaccagcttaggagccatagcagat
ggcaagactgactcaaccaaggccttcctctctgcctggtccaaagcttgtgcgtccgtg
cagcccgctgtgatttatgtcccctctgggaggttcctgcttcgaaatgctgccttcagc
gggccttgcaagaacaacgccatcaccttccgcattgacggcaccctcgtggccccctcc
gactaccgcgtcattggaaacgagcctaactggatcttgtttgagcatgtgaatggggtc
accatttctggaggacttctcgacggacagggcactggcttgtgggcttgcaaggcctca
accaagagttgccccagcggagcaaccacactgggtttttccagctccaacaacattgtg
gtgaatggattagcatccctaaacagccaaatgttccacatagtgatcaacgggtgtcaa
aatgtgaaaatgcaaggtgtgaaggtttccgcctccggtaacagccccaacaccgatggc
atccacgttcaaatgtcttctggagtcaccattctcaactccaaaattgcaactggtgat
gattgtgtctcagttggccctggcaccaccaatttgtggattgaaaacgtcgcatgtgga
cccggccatggaatcagtattgggagcttaggaaaggagccacaagaggatggtgtccaa
aatgtaacagttaaaacggttacctttactggtactcagaatggtgtaagaattaagtct
tgggggagacctagcactggatttgcgaggaacattcttttccaacatgttgtaaatgtc
aatgttcaaaatcccatcgtcattgatcaaaattattgccctggaaacaaagattgtcct
ggtcaggtttctggagttaaaatcagcgacgtgatataccaagacattcatggtacatcg
gcaacacaagtggctgtgaaattcgattgtagttccaagtacccttgtagcggaatcaaa
ttggaggatgtgaagctcacttacaaggaccaagcagctgaagcttcatgcaagtatgca
ggcggaacagcgaccggtacggttcaacctacaagttgcttgtag
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