Prunus mume (Japanese apricot): 103341471
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Entry
103341471 CDS
T03196
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03420
Nucleotide excision repair
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103341471
09124 Replication and repair
03420 Nucleotide excision repair
103341471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pmum03051
]
103341471
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103341471
Proteasome [BR:
pmum03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103341471
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103341471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
TECR_N
Dsc3_N
UBA_RAD5A
UBA_3
Crinkler
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
103341471
NCBI-ProteinID:
XP_008243219
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MKIFVKTLKGTHFDVEVKPEDTVADVKKQIETSQGSDVYPASQQMLIHQGKVLKDSTTLD
ENKVAENSFVVIMLTKSKSSSGEGSGASTATTTKAPQPSAPSAAPTATLTAPQAPIPTSA
PPASVTTPAPVSSATTEVESDPYGQAASDLVAGTNLEGTIQQILDMGGGTWDRDTVVRAL
RAAFNNPARAIDYLYSGIPEQPEVPPAARIPVSGEVANLPAQPPQSAQPAATPPSGPNAN
PLNLFPQGLPNVGAGAGAAGNLDFLRDSQQFQALRAMVQANPQILQPMLQELGKQNPNLM
RLIQQHQADFLRLINEPVEGGEGNILGDAAVPQSISVTPEEREAIERLEAMGFDRAIVLE
VFFACNKNEELAANYLLDHMHEFEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtcaagactctcaagggcactcacttcgacgtcgaagtgaagcctgag
gacacggttgctgatgtgaagaaacagatagaaactagtcaaggttcagatgtatatcct
gcttcacaacagatgctcattcatcaaggaaaagtacttaaagatagcacaacattggat
gaaaacaaagttgctgaaaacagctttgttgtgataatgttgacaaagagtaagagctcg
tctggtgaaggttcaggtgcatcaactgcgactacaactaaggcaccacagccaagtgca
ccttctgctgctccaactgcgacattaacagcacctcaggctccaataccaacctcagca
ccgcctgcttctgttaccacacctgctcctgtctcttcagctaccacagaggtagaatct
gatccctacggccaagcagcatctgatctggtagcaggaactaacttggagggaacgatt
cagcaaattctggatatgggtggaggtacttgggacagggatactgttgtacgtgctctt
cgtgctgctttcaacaacccagcgagagctattgactatctttattctggtatccctgag
caacctgaagttccacctgcagcccgtattcctgtgagtggggaagttgcaaaccttcca
gcacaacctccgcaatctgcacaaccagcagccactccaccaagcggacctaatgccaat
cctttaaacctttttccacagggccttccgaacgtgggtgctggtgctggtgctgcaggc
aatcttgattttcttcgtgacagccaacagttccaagccttgcgagctatggtgcaggct
aatccacaaatattgcagcctatgcttcaagagttagggaaacaaaatcctaatcttatg
aggctaattcaacagcatcaggctgacttccttcgcctgattaatgaacctgtggaaggt
ggagaagggaacatattgggcgatgcagcggtgccgcagtcaataagtgttactcctgag
gagcgtgaagctatagaacgtcttgaagcaatgggatttgatcgagcaattgtattggag
gttttctttgcctgcaacaagaacgaagagttggctgccaactacctcttagaccacatg
catgaatttgaggaataa
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