Prunus mume (Japanese apricot): 103341908
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Entry
103341908 CDS
T03196
Name
(RefSeq) pyridoxal 5'-phosphate synthase subunit PDX1.3
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00750
Vitamin B6 metabolism
pmum01100
Metabolic pathways
pmum01240
Biosynthesis of cofactors
Module
pmum_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
103341908
Enzymes [BR:
pmum01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
103341908
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
103341908
NCBI-ProteinID:
XP_008243681
UniProt:
A0ABM0PS64
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Position
LG1:complement(22214119..22215568)
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AA seq
309 aa
AA seq
DB search
MAGSGVVAVYGNGAITESKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDES
EVLTLADEEHHINKHNFRVPFVCGCRNLGEALRRVREGAAMIRTKGEAGTGNIIEAVRHV
RSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALM
MQLGCDGVFVGSGVFKSGDPVKRGRAIVQAVTHYRDPDVLAEVSCGLGEAMVGLNLKDEK
VERFANRSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttccggcgtggtggctgtgtacggaaatggagcaatcaccgagagcaagcaa
tcgccgttctccgtcaaagtgggcctagcccaaatgctccgcggcggcgtcataatggac
gtcgtcaacgccgagcaggctcgaattgcagaggaggcaggcgcgtgcgccgtcatggcc
ctggagcgggtgcccgcagatatccgagcccagggtggggtggcccgaatgtccgacccg
caactcatcaaagaaatcaagcaggccgtgaccatacccgtcatggccaaggcccgaata
ggccacttcgtcgaggcccaaatcctggaagccatcggcgtcgattacgtcgatgagagc
gaggtcctgaccctcgccgacgaagagcaccacatcaacaagcacaatttccgggtgccg
ttcgtctgcgggtgccggaatctcggcgaggcgctccgccgagtccgagaaggagcggct
atgatccggaccaagggtgaggccggcacggggaacatcatcgaagcggtgaggcacgtg
cggtccgtgatgggggacattagggttttgcggaacatggacgacgacgaggtgttcact
ttcgcgaagaagatcgcggcgccgtacgatctggtgatgcagacgaagcagctggggagg
ctgcctgtggtgcacttcgcggctggaggggtggcgacgccggcggatgcggcgctgatg
atgcagctgggttgcgacggggtgttcgtcgggtctggcgtgttcaagagcggtgacccg
gtgaagcgggggagggcgattgtgcaggctgtgacccattacagggacccggatgtgctg
gctgaggtgagttgcgggttgggcgaggccatggttgggttgaatttgaaggacgagaag
gtggagaggtttgctaatcggtctgagtga
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