Prunus mume (Japanese apricot): 103342159
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Entry
103342159 CDS
T03196
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103342159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103342159
03009 Ribosome biogenesis [BR:
pmum03009
]
103342159
04131 Membrane trafficking [BR:
pmum04131
]
103342159
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103342159
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103342159
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103342159
Membrane trafficking [BR:
pmum04131
]
SNARE
SNARE associated proteins
Others
103342159
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103342159
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103342159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
AAA_18
RNA_helicase
AAA_17
AAA_28
Mg_chelatase
nSTAND3
Parvo_NS1
ATPase_2
IstB_IS21
Vps4_C
Zeta_toxin
AAA_7
Viral_helicase1
ABC_tran
AAA_24
NB-ARC
NACHT
TsaE
DUF815
ResIII
Sigma54_activ_2
UFD1
Zot
Motif
Other DBs
NCBI-GeneID:
103342159
NCBI-ProteinID:
XP_008243978
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MTDKAESSDSKGTKRDFSTAILERKKAANRLVVDDAINDDNSVVALHPDTMEKLQLFRGD
TILIKVRXXXXXICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSEYCV
VAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVVRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDEEIDAEILNSMAVTNEHFKTALGTSNPSALRETVVEVPNVSW
EDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQI
FKSCLRKSPVSKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSEN
PEAMEEDVDDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAD
NPSSAAAGSDPFATVAAGADEDDLYN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaggctgaatcttcagactctaagggaacgaaaagggacttcagcacggcg
atccttgagcgcaagaaggctgcgaatcggcttgttgtggatgatgctatcaacgatgac
aactcggtcgtcgcgctccatccagataccatggagaagctccagctctttcgtggtgac
acaatcttgataaaggttcgnnnnnnnnnnnnnncaatctgcattgccctggctgatgat
acatgtgaggaaccaaagataaggatgaacaaggttgtcagaagcaacctaagggttagg
ctgggggatgttgtttctgttcaccaatgtgctgatgtcaagtatggaaagcgtgtccac
attcttcctgtggatgacactattgaaggggtcactggaaatctgtttgatgcatacttg
aaaccttatttcctggaggcctaccgtccagtgaggaagggtgatctcttccttgtgaga
ggaggaatgaggagtgtagaatttaaggttattgaaacagacccttctgagtactgtgtg
gtcgctcccgacactgaaatcttctgtgagggggagcctgtgaaaagggaggatgaggag
agattaaatgaggttggctatgatgatgttggtggagttaggaaacagatggctcagatt
cgtgaattagtggagctgccactgaggcatcctcaactatttaaatcgattggtgtgaaa
ccaccaaagggtattctgctgtatggacctcctggatcgggtaagactctaattgcccga
gctgtggctaatgaaaccggggcattctttttctgcatcaatggacctgaaatcatgtca
aaattggctggggagagtgaaagcaatctcaggaaagcttttgaggaagcagagaagaat
gcaccatcaattatctttattgatgaaattgattcaattgctcccaagagagagaagaca
catggagaagttgagaggaggattgtttcccagctcttgacgctcatggatggactgaag
tctcgtgcacatgtaattgttatgggggctacaaatcggccaaacagtattgatccagct
ctcagaaggtttggaagatttgatagggaaatagatattggtgtaccagatgaagttggg
cgtctcgaggttgtccgtattcatacaaagaacatgaagcttgctgaagatgttgatttg
gaaaagatagctaaggacacacatggttatgttggtgctgatctagctgctttgtgtact
gaggctgctcttcaatgcatcagagagaagatggatgtgattgacttagaagatgaggaa
atagatgctgagatcctgaattcaatggcagtgacaaatgagcacttcaagactgctctt
ggcacaagcaacccatctgctcttcgtgaaacagttgttgaagtgcccaatgttagctgg
gaagatattggaggtcttgacaatgttaagcgagaacttcaagagactgttcagtatcct
gttgagcatcctgagaaatttgagaaatttggaatgtcaccttcaaagggagttcttttc
tatggtcctcctggatgtggtaaaactcttctcgccaaagctattgccaatgagtgtcaa
gcaaacttcatcagtgtcaagggacctgaattgctaacgatgtggtttggagagagtgag
gccaatgtgagggaaattttcgacaaggcccgtgggtctgctccatgtgtcctgttcttt
gatgaactcgattccattgctactcagaggggtagtagcgtaggtgatgctgggggtgca
gctgacagggttttgaaccaactccttacagaaatggacggaatgactgctaagaaaact
gttttcattattggggccaccaacagacctgacattatagaccctgcacttctacgtcca
ggacgtctggatcagttaatttacatccctctccctgatgaggaatctcgctttcaaata
ttcaaatcatgtttgaggaaatctccagtttccaaagatgtggacatcagagcacttgcc
aagtacacccaaggattcagtggtgctgatataactgaaatatgccagcgtgcttgcaaa
tatgccattagagagaatattgagaaggatatcgagagggagaggaggagaagcgagaat
cctgaggcgatggaggaggatgttgatgacgaagtagcagagatcagggcagctcatttt
gaggagtcaatgaagtatgctcgtaggagtgttagtgatgctgatatccgcaaataccag
gcatttgcgcagacattgcagcagtcaagagggtttggaaccgagttcaggttcgcagac
aatccttctagtgcagccgctggatccgacccttttgcaactgttgctgctggggctgat
gaagatgacctttacaactag
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integrated database retrieval system
