Prunus mume (Japanese apricot): 103342177
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Entry
103342177 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: histidine--tRNA ligase, chloroplastic/mitochondrial
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103342177
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103342177
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103342177
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
103342177
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class II (A)
103342177
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103342177
Prokaryotic type
103342177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
DUF4473
Motif
Other DBs
NCBI-GeneID:
103342177
NCBI-ProteinID:
XP_008243997
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MLSSAVSSSLLILHKPFARVIRFPIPKLPLSPNPRPLASLSPAASALTPNALGAGGRAGA
LSPAPITEDLQKIDVNPPKGTRDFPPEDMRLRNWLFYHFREVSRLFGFEEVDFPVLESEA
LYIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSLSLPVKWFAVGQCWR
YERMTRGRRREHYQWNMDIIGIPEVTAEAELISSIVTFFKRLGITTSDVGFKVSSRKVLQ
EVLRHYSIPEALFGKVCIIIDKIEKIPVDDMKKELKSAGVSEEAIEQLLQVLSIKSLTKL
EEILGDAGEAVADLKQLFSLAEKFGYSEWIQFDASIVRGLAYYTGIVFEGFDRGGKLRAI
CGGGRYDRLLSXPACGFGFGDAVIVELLKEKGLLPELSLQVENIVCALDPGLQGAAATVA
TILRGKGQSVDLVLENKPLKWVFKRAARINANRLILVGDSEWQRGMVGVKILSSGEQHEI
KLDELE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctccgcagtctcttcttccctccttatcttacacaagccctttgctcgcgtt
atcagattccccatccccaaactccctctctctcccaaccctagacccctcgcttctctc
tcacccgccgcttctgctctcacccccaatgccctcggcgccggcggtcgcgccggagct
ctatctccggcgccgatcaccgaagacctccagaagatcgacgtcaaccctcccaagggc
accagggacttcccgcccgaagatatgcggctccgcaactggctcttctaccatttcaga
gaggtctcgcggttgtttggcttcgaagaggtcgactttccagttctcgagtccgaggct
ctgtatattagaaaagcaggagaggaaattcgagaccagctatattgcttcgaagaccga
ggtaatcgtcgagttgcattgaggcctgagctcactccttctttggcaagactggttata
cagaaaggaaaatctctatcccttccagtgaaatggtttgccgtggggcagtgttggcgg
tatgagaggatgacgagggggcggcgaagggagcattaccaatggaatatggacattatt
ggtatacctgaagttacggctgaagcagaacttatttcttcaattgtcactttcttcaag
cgattaggaattaccacatcagatgttggatttaaggtttcaagtcgaaaggttttgcaa
gaagtattgaggcattactccatacctgaagctttatttggcaaggtttgcatcatcata
gacaagatagagaagattccagtggatgatatgaaaaaagagttgaaatctgctggtgtg
tcagaagaggctattgagcagttattgcaagttctttccataaagtctttgacaaagttg
gaagagatccttggagatgccggtgaagcagttgctgatctgaagcagctattctctctt
gcagagaaatttggttattctgaatggattcagtttgatgcttctattgttcgtggcctt
gcctactatactggtattgtcttcgagggttttgatagaggaggaaagttgcgagccatt
tgtggtggtgggcgatatgaccgcttgctttcanttcctgcttgtggctttggatttggt
gatgctgtcatagtggaattgctaaaggagaagggtcttctgccagaactcagcctgcaa
gtagaaaacattgtgtgtgctctagatcctggacttcaaggagccgctgccacagttgcc
accatactcaggggaaaaggtcaaagtgttgatttagtcttggagaacaaaccgctcaaa
tgggtattcaagcgtgcagcaagaataaatgctaataggttgatattggtgggagattca
gagtggcaaaggggtatggtgggtgtgaaaatactctcttccggtgaacaacatgagatc
aaacttgatgaactagagtga
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