Prunus mume (Japanese apricot): 103342210
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Entry
103342210 CDS
T03196
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103342210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103342210
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
103342210
Prokaryotic type
Archaeal type
TFE
103342210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
YBR138C_C
Zn_ribbon_8
DUF8255
DUF7836
HVO_A0261_N
Zn_ribbon_CLPX_N
Zn_ribbon_SprT
CpXC
Ribosomal_aS21
Zn_Ribbon_TF
Cas12f1-like_TNB
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
103342210
NCBI-ProteinID:
XP_008244040
UniProt:
A0ABM0PT18
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MSIEPFNKLVKLVGRAFYDDITKGDNQPKTGRSDNRGIAVVVLDALSRRQWVREEDLAKD
LKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAKMHNAAVAATIDGLPAKEGEEKVKMHT
HSYCCLDYAQISDVVRYRVQRMKKKLKDELEDKNTVQEYVCPNCGKRYNALDALQLVSME
DEYFHCESCNGELVAESDKLASQEVGDGDDNARRRRREKLKDLLQKMEAQLKPIYDQLNR
VKDLPAPEFGGLQAWEARASAAKRAENGESNGMDPSKSSHGLGYGGTPMPFLGDTKVEVD
FSGVEGKGKDIKSEADGAGLKVLPPWMIKQGMNLTKEQRGEVKQEAKMDGSGSLAAPEYS
EDKKFNTENNDKNLQDEYLKAYYAALIKRQEEEEAKKALESSETRVSDGPSGMSPSRQVG
MKSKRDEDEGDDNVDWEEAPITGNEENFKVNDLNVEADATAEAEAEDEDDIDWEEG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgagcctttcaacaagttagtgaagcttgtggggagagcgttctacgacgac
attaccaaaggagataatcagcccaagaccggccggagcgacaataggggaatcgccgtg
gtggtgctcgatgccctctctagacgacaatgggtcagagaagaggatttggcaaaggac
ttgaaactgcactcaaagcaacttcgtcgtactttgcgattttttgaggaggaaaaactg
gtcaccagagatcataggagagagacagctaagggtgcgaagatgcataatgctgctgtt
gctgccacgattgatgggctacctgcaaaagaaggggaagagaaagttaagatgcacact
cactcttattgctgtctggactatgcgcagatatccgatgtggtgaggtacagagtgcag
cgtatgaagaaaaaactgaaagatgaattggaggacaagaacactgttcaggaatatgta
tgccctaactgtgggaaaagatacaacgctttagatgcattgcaactggtttctatggag
gatgagtacttccactgtgaaagttgtaatggggaacttgtggctgagagtgacaagcta
gcttctcaagaagtcggagatggagacgacaatgcgaggaggcgacgacgtgaaaaattg
aaagacttgcttcaaaagatggaggcacaactaaagcctatatatgatcaacttaataga
gttaaagacttacctgctcctgaatttggaggtctccaagcttgggaagcgcgagcaagt
gcagctaaacgtgcggagaatggtgaatctaatggcatggatccctccaaatcttctcat
gggttgggatatggtggaacaccaatgccctttcttggagatacaaaggttgaagttgac
ttttctggggttgaaggcaaggggaaggatatcaaatctgaagctgatggtgcaggcctg
aaagttttgccaccttggatgatcaagcaagggatgaaccttacaaaggaacaacgtgga
gaggtcaagcaagaggcaaagatggatggcagtggcagtttagcagctccagaatactca
gaggacaaaaagtttaatactgaaaacaatgacaagaatttacaggatgagtacttgaaa
gcttattacgctgctttaataaaaagacaagaagaagaagaagcaaagaaagctctggaa
tcctcagaaacacgcgtctctgatggcccttccggaatgtctcctagccgtcaggtcggc
atgaaatcaaagcgtgatgaggatgaaggagatgataatgtggactgggaagaggctcca
attacaggtaatgaagaaaatttcaaggtcaatgacttgaatgtggaagctgatgctaca
gcagaggcagaagcagaggatgaggatgatatagactgggaggaaggctga
DBGET
integrated database retrieval system
