KEGG   Prunus mume (Japanese apricot): 103342252
Entry
103342252         CDS       T03196                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103342252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103342252
   03036 Chromosome and associated proteins [BR:pmum03036]
    103342252
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103342252
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103342252
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR75_2nd Beta-prop_BBS7
Other DBs
NCBI-GeneID: 103342252
NCBI-ProteinID: XP_008244086
LinkDB
Position
Unknown
AA seq 351 aa
MSSFMAAANVNSNSNPNPNKSFEVAQPPNDSISSLSFSPKSNILVATSWDNQVRCWEILQ
SGTNLASQPKAAISHDHPVLCSTWKEDGTTVFSGGCDKQVKMWPLGGQPVTVAMHDAPIK
EIAWIPEMSLLVTGSWDKTMKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGTADRNLI
VFNLQNPQTEFKRILSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEQQQNKNFTFK
CHREGSEIYSVNSLNFHPVHHTFATAGSDGSFNFWDKDSKQRLKAMSRCNQPIPCSTFNN
DGSIFAYAVCYDWSKGAENHNPATAKNYIFLHVPQEAEVKSKPRVNTGGKR
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgtcgagtttcatggctgctgcaaatgtaaattcaaattcaaatccaaatccaaacaag
tcctttgaggtcgctcaacctccaaacgactccatatcaagcctaagtttcagtcccaaa
agcaacattctggtcgccacctcctgggacaaccaggtgcgatgctgggagatactccag
agcggaacaaatcttgccagtcagcccaaggcagcgatatcccatgaccatccggttttg
tgctcaacttggaaagaggatggaacgactgtgttctctggaggttgtgacaagcaagtt
aagatgtggcctttgggtggccagccagtaactgttgccatgcatgatgcacccattaaa
gagattgcttggatccctgagatgagcctcttagtcacaggaagctgggacaagactatg
aagtattgggacgtgaggcagccaaatccagtgcatacccaacaactacctgagcgctgt
tatgctctatcagtgagataccctctaatggttgttggcacagcagacagaaatctgatt
gtttttaacttgcagaacccacagactgaattcaagagaattctttcgcccctcaagtat
caaacaaggtgtgttgctgcgtttcctgatcagcaaggattcttggttggctccattgaa
gggagggttggcgtacatcatctggatgaacaacaacaaaataaaaactttacctttaag
tgccatagagagggcagcgagatatactcagtcaactctctgaacttccatccagtgcat
cacacatttgctactgctggttctgatggttctttcaatttttgggataaggatagcaaa
cagagactaaaggcaatgtcaaggtgcaatcaacccataccttgcagtacattcaacaat
gatggttccatatttgcatatgcggtttgctatgattggagcaagggtgctgaaaatcat
aatccagctaccgcaaagaactacattttcctccatgtgccacaggaagctgaggttaag
agcaaaccacgagtcaacactggtggaaaaaggtga

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