Prunus mume (Japanese apricot): 103342252
Help
Entry
103342252 CDS
T03196
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103342252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103342252
03036 Chromosome and associated proteins [BR:
pmum03036
]
103342252
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103342252
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103342252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
103342252
NCBI-ProteinID:
XP_008244086
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MSSFMAAANVNSNSNPNPNKSFEVAQPPNDSISSLSFSPKSNILVATSWDNQVRCWEILQ
SGTNLASQPKAAISHDHPVLCSTWKEDGTTVFSGGCDKQVKMWPLGGQPVTVAMHDAPIK
EIAWIPEMSLLVTGSWDKTMKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGTADRNLI
VFNLQNPQTEFKRILSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEQQQNKNFTFK
CHREGSEIYSVNSLNFHPVHHTFATAGSDGSFNFWDKDSKQRLKAMSRCNQPIPCSTFNN
DGSIFAYAVCYDWSKGAENHNPATAKNYIFLHVPQEAEVKSKPRVNTGGKR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttcatggctgctgcaaatgtaaattcaaattcaaatccaaatccaaacaag
tcctttgaggtcgctcaacctccaaacgactccatatcaagcctaagtttcagtcccaaa
agcaacattctggtcgccacctcctgggacaaccaggtgcgatgctgggagatactccag
agcggaacaaatcttgccagtcagcccaaggcagcgatatcccatgaccatccggttttg
tgctcaacttggaaagaggatggaacgactgtgttctctggaggttgtgacaagcaagtt
aagatgtggcctttgggtggccagccagtaactgttgccatgcatgatgcacccattaaa
gagattgcttggatccctgagatgagcctcttagtcacaggaagctgggacaagactatg
aagtattgggacgtgaggcagccaaatccagtgcatacccaacaactacctgagcgctgt
tatgctctatcagtgagataccctctaatggttgttggcacagcagacagaaatctgatt
gtttttaacttgcagaacccacagactgaattcaagagaattctttcgcccctcaagtat
caaacaaggtgtgttgctgcgtttcctgatcagcaaggattcttggttggctccattgaa
gggagggttggcgtacatcatctggatgaacaacaacaaaataaaaactttacctttaag
tgccatagagagggcagcgagatatactcagtcaactctctgaacttccatccagtgcat
cacacatttgctactgctggttctgatggttctttcaatttttgggataaggatagcaaa
cagagactaaaggcaatgtcaaggtgcaatcaacccataccttgcagtacattcaacaat
gatggttccatatttgcatatgcggtttgctatgattggagcaagggtgctgaaaatcat
aatccagctaccgcaaagaactacattttcctccatgtgccacaggaagctgaggttaag
agcaaaccacgagtcaacactggtggaaaaaggtga
DBGET
integrated database retrieval system