Prunus mume (Japanese apricot): 103342354
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Entry
103342354 CDS
T03196
Name
(RefSeq) protein LHY-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103342354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103342354
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
103342354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
C2orf69
Motif
Other DBs
NCBI-GeneID:
103342354
NCBI-ProteinID:
XP_016652255
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MEPHSSREDLVIKARKPYTITKQRERWTHEEHNKFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAHVNGVPIGQSIGIDIPPPRPKRKPCNPYPRKSSSAASTCAALHV
GAKVGKLLSSASSSCYKQVVDLEKEPLHERPFGEEKANNAENQVANWAEVFTLLQDGHCS
SVSSANNNSIPSQVALGNACTLRDATNESHVTINLKGNQNLKKIDAKMIVGDNGTSGAPK
SGNTNNAFHKELVQGEKISSLIVSSLLQNPAAHAVASSTAAFWPYANAKNRKDPPSMAAI
AAATVTAATAWSAVHRLLPRQTDFRCSPISMTGVPVPSMDTGQAPPAKREKGESSLQIPS
LQDQQLDSRHTEAVEAQHSNIAKANTDDEKDVASTEEVHDSNHAKSRKQQVDRSLYGSNT
PSDSEDETAAIEKNEKGREELKEPNASHPAAESSQRRCRCVSNMYDSWKEVSEEGRLAFH
ALFSRDVLPQSFSLTQDLKIKGHQNDGMED
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacactcatctagggaagatttggtcatcaaggcaagaaagccatatacaatt
accaagcagcgagagcgatggacacatgaggagcataataagtttcttgaagccctgaag
ctctatggccgagcatggcagcgcattgaagaacacattggaacaaagactgctgtgcag
atcaggagtcacgctcagaaattcttttccaagctggagaaggaggcacacgttaatggc
gttcccataggacaatcaattggcattgatattccgcctccacgtcccaaaagaaaacca
tgcaatccttatcctcgaaagtctagttcagctgcatcgacatgtgccgcattgcatgtg
ggagcaaaggttggaaaacttttatcatcagcgtcttcttcatgctataaacaagtagtg
gacttggagaaagaaccacttcatgagagaccctttggagaagaaaaggcaaataatgca
gaaaatcaggtagccaactgggcagaagtcttcaccttgctccaagatggtcattgctcc
tctgtttcttctgcaaacaataattccataccctcacaggtagcactcggaaatgcatgc
actttaagggatgcaacaaatgaatctcatgtcactattaaccttaaaggaaatcagaat
ttgaagaaaattgatgccaaaatgatagttggcgataatggcacaagtggagctccaaag
tcggggaacactaataatgcttttcataaggagttggttcaaggtgagaaaatttcaagt
cttattgtgtcttctctgttacaaaatcctgcagcccatgctgtggctagctccacagcc
gcattttggccttacgcaaatgcgaaaaataggaaagaccccccaagtatggcagcaatt
gctgctgccactgtaactgctgcaactgcttggtcggcagtccatagactgcttcctcgt
caaactgattttagatgttctcccatctctatgaccggggttccagttccatcaatggat
actggtcaagctcctccagccaagagagagaaaggagagagttctctgcaaattccttcc
ttgcaggatcaacaattggactcaagacacacggaagctgtggaagctcaacattcaaac
attgcaaaggctaatactgatgatgagaaggacgttgcgtcaactgaagaagttcatgat
tcaaaccatgcaaagagcagaaaacagcaggttgaccgttccttatatggttccaacaca
ccatccgacagtgaagacgagacagctgcaatagagaagaatgagaaagggagggaagaa
ctaaaagagcctaatgcaagtcacccagctgctgagtctagtcaacgtcgctgtagatgt
gtcagcaacatgtatgattcatggaaagaggtctctgaagaggggcgcctggcctttcat
gcactattctcaagagatgtattaccccagagtttttcacttacacaggacctcaagatt
aaggggcatcagaatgacggtatggaagactga
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