Prunus mume (Japanese apricot): 103343111
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Entry
103343111 CDS
T03196
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103343111
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103343111
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103343111
03036 Chromosome and associated proteins [BR:
pmum03036
]
103343111
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103343111
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103343111
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103343111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EML
Cytokin_check_N
Motif
Other DBs
NCBI-GeneID:
103343111
NCBI-ProteinID:
XP_008245009
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MTLSSDPPAPLDWKFSQVFGERAPGDDLQDVDMISAIEFDKSGDFLAIGDRGGRCIIFER
KDGKHTLNQHHSRHELEQLDFTSTQHPEFQFKTEFQGHEPEFDYLKSVEIEEKINKVRWC
ATSSGSQFMLSTNDKTIKLWKVKECKVKKVKEMNAHPFACLDNMLLAERSFVSREDKPAV
ANGYRQEWMEKIAKNASPSQDMHSKAADMEDTAHTRCRKVYAHAHDFNINSISNNSDCET
FLSADDLRINLWNLEISDQCFNILDMKPANMEDLTEVITTAEFHPVHCNLLAYSSSRGFI
RLVDMRQSALCDHSARILQDGDSHGLKSFFTEIIASISDMKFSRDGRHILSRDYMNLKLW
DTHMDSSPVAIYKIHEHLRPKLSELYNNDRIFDRFGCCFSGDGLHFATGSYSNLVRIFSG
GDGSEEGATIEASKTPNSRKPLIRTAARARRSSLSNLARGFYRHGHENSSSGSNESSYDL
SSRLLHLAWHPETNLIASAAGNSLFMYYS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgactttgagctctgaccctcccgctcctctagactggaaattctctcaggtgttcggc
gaacgagctcccggagacgaccttcaggatgttgatatgatatctgcaatagaattcgac
aagagtggtgatttccttgctattggagatcgaggtggccgctgcataatattcgagagg
aaggatgggaaacatactttaaatcagcatcattctcgacatgagctggagcagttggat
ttcacatccacccagcatcctgagtttcaatttaagactgagtttcaaggtcatgaaccc
gagtttgactacttaaagagtgtggaaattgaagagaagatcaacaaagttagatggtgt
gcaacatctagtggatcccaattcatgctttctacaaatgacaagacaataaaactgtgg
aaggtcaaggaatgcaaggtgaagaaagtaaaagaaatgaacgctcatccatttgcatgt
ttagataacatgcttctggctgaaaggagtttcgtcagtagggaagataaaccagctgtt
gcgaatggctatcgccaggaatggatggagaagatcgctaagaatgcctcaccatctcaa
gacatgcattccaaggcagctgacatggaagatactgctcatacaagatgccgaaaggtg
tatgctcatgctcatgattttaatattaactccatctcaaataatagtgattgtgaaaca
tttctttctgcggatgatcttagaataaacttgtggaatcttgagatcagtgatcagtgt
ttcaatatccttgatatgaagccagcaaacatggaggatcttactgaggtcataacaacg
gctgaattccatcccgttcattgtaatctgcttgcatacagtagctcaagaggttttatt
cgtttagttgacatgcggcagtcagctttgtgcgatcacagtgcaagaatattacaagat
ggagattctcatgggctgaaatcatttttcacagaaattattgcatccatttctgatatg
aagttttcgagggatggacggcacatcttaagtcgtgactacatgaatctaaagctctgg
gacactcatatggattcttcaccagttgcaatatacaagattcatgagcatctgcgccct
aagttatctgagttgtataacaatgatcgcatatttgatagatttggttgctgcttcagt
ggagatggacttcattttgcaactggatcttatagcaacctagtgcgcattttctccggt
ggagatggaagcgaagaaggagctacaatagaagctagcaaaactcccaacagcaggaaa
ccacttatccggactgctgcaagggctaggaggtcatccttgagcaatctggcacgagga
ttttaccggcacgggcatgaaaattcaagctcgggcagtaatgaaagtagttatgaccta
agctccaggctactacatttggcatggcatccagaaacaaacttgattgctagtgccgct
gggaatagcttgttcatgtattattcatag
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