Prunus mume (Japanese apricot): 103343246
Help
Entry
103343246 CDS
T03196
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
pmum03015
mRNA surveillance pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103343246
09122 Translation
03013 Nucleocytoplasmic transport
103343246
03015 mRNA surveillance pathway
103343246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103343246
03041 Spliceosome [BR:
pmum03041
]
103343246
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103343246
Spliceosome [BR:
pmum03041
]
Complex C
Other components
EJC/TREX
103343246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
103343246
NCBI-ProteinID:
XP_008245135
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MSSPYPILDNRPIDQWKVTELKEELKKRKLTTKGLKDDLIKRLDEAIRIERANNGLNGDP
QPVVGVKVVEPRSGSRTPKSIGSGGRKRTEKVDVPVQIDNRAATLDQGNIQEGYILVDKN
ACAIVEEELGQSTTVETTVETSVTVTESVVTEEVVVVQDSQNTEANKGNRNSKPLLENEY
AKPLLENEDPKPRLENEDPKPQLENEDPKPRLENEDPEPQLENEDPKPQLENEDPEPQLE
NVDLKPQLENEAQKPQLEIEDLKPQLENEGLEPTAKDDMLGSSAPNHQVSEVRTLGSEVK
YDSISTDSVSINETIELKDNIIDHVKLELDIVKPEMVDPSSSTVVPVSGDSHPMDVDEPL
EDKASLGEKDDNITNADISKKNDNADLGYSEILNLERSSGDDSMEEDVLDSKQIDSKYSS
DDVGDIGEKNEVPIVNEESRAGIVGDDIATDKNDVSVENKNHPALPAEKRKLNDQAAVGS
NEPVKRRRWNSENLKVPELQSPLQTPSVTPKDTFQTPSLKRSFSRSNSTMGEDAPKERVV
PPSQKPPTNSLRIDRFLRPFTLKAVQELLGKTGKVTDFWMDHIKTHCYVTYSSAEEALET
RNAVYNLQWPPNGGRLLVAEFVDPQEVQTRVQIPQTPATPISSGPAVPVAPSTSQPQPSP
RQPRQQQQQLPPPPSLPPPPPLTAPSSARERLPLPPPPPLLEKLDTPIVTLDDLFRKTKS
TPRIYYLPLSEEQVAEKLAAQGKNAK
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccatatccaattctcgataatcgaccaattgatcaatggaaggttacagaa
ttaaaagaggagctcaagaagcggaaattgacaaccaagggtttgaaggatgatttgata
aagcggttggatgaagcaatacgaattgaaagggcaaataatggtcttaatggtgatccc
caacctgttgttggggtgaaagttgtagagccacgttcaggttctagaacacctaaaagt
attggttctggtggacgtaaaaggactgaaaaagttgatgttccagttcagattgacaac
cgcgcagcaactttggatcaagggaatattcaagaaggttatattttggtggataaaaat
gcatgtgctattgttgaagaggagctgggtcaatcgactactgtggaaaccactgtggaa
accagtgttacggtcaccgagagtgtggtaactgaggaagtagtagttgtgcaagattca
cagaacactgaagccaataaggggaataggaattcaaagcccctactggagaatgagtat
gcaaagcccctgcttgagaatgaggacccaaagccccggcttgagaatgaggatccaaag
ccccagcttgagaatgaggacccaaagccccggcttgagaatgaggatccagagccccag
cttgagaatgaggatccaaagccccagctggagaatgaggatccagagccccagctggag
aatgttgatctaaagccccagctggagaacgaggctcaaaagccccagttggagattgag
gatctaaagccccagctggaaaatgagggtttagagcctacagccaaggatgacatgctc
ggctcttctgctccaaaccaccaggtatctgaggtcagaactttagggtctgaagtaaaa
tatgattctatttctactgattctgtgtcaattaatgaaacgattgaactaaaggataat
ataattgatcatgtcaaattagaattagatattgttaagccggagatggtggacccatca
tccagcactgttgttccagtcagtggtgattcacatccaatggatgttgacgagccactt
gaggacaaggcatctcttggagagaaagatgacaacattacaaatgcagacattagcaag
aaaaatgataatgcggatttggggtactcagaaatattaaatttagagagaagttctgga
gatgattctatggaagaagatgtgttggacagtaaacaaattgattcaaaatatagttct
gacgatgtgggagatattggtgagaaaaatgaagttcctattgtgaatgaggaaagtcgt
gctggtattgtgggagatgatattgccacagacaaaaatgatgtaagtgttgagaacaag
aatcatccagctcttcctgcggagaaaagaaagcttaatgatcaagcagcagttggaagc
aatgagcctgtaaagaggcgcaggtggaactctgaaaaccttaaagttccagagctgcaa
agccctcttcaaacaccttcagtcacacccaaggatactttccagacccccagtttgaag
cgtagcttttcaagatcaaactctacaatgggtgaggatgcccccaaggaacgtgttgtt
ccaccatcgcagaagcctccaactaattcccttagaattgatcgatttctgcgacctttc
accttgaaagctgtgcaagaacttttaggcaaaactgggaaggttactgatttctggatg
gaccacatcaagactcattgctatgttacttattcatcagcggaagaagccttggagaca
cggaatgctgtgtataacctacagtggcctcccaacggtgggcgtcttttagtggccgag
tttgttgatccccaggaagtgcaaacacgggttcagattcctcagactcctgctacaccc
atcagcagcggtcctgctgttcctgttgccccatccacctcacagccacagccttcaccc
cgtcaacctaggcagcagcagcagcagctgccaccaccgccttctcttccacctccacca
cctttgactgccccttcctcagcaagagaacggcttcctttgcctcccccacctcctcta
ctggagaaacttgatacaccaattgtcactttggacgatctctttcgaaaaaccaagtca
actcctcgaatctattacttacctttgtcggaagaacaagtggctgaaaaacttgcagca
cagggcaaaaatgccaagtag
DBGET
integrated database retrieval system
