KEGG   Prunus mume (Japanese apricot): 103343717
Entry
103343717         CDS       T03196                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03020  RNA polymerase
pmum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103343717
  09124 Replication and repair
   03420 Nucleotide excision repair
    103343717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmum03021]
    103343717
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103343717
Transcription machinery [BR:pmum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103343717
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103343717
SSDB
Motif
Pfam: RNA_pol_Rpb4 Glycos_transf_1
Other DBs
NCBI-GeneID: 103343717
NCBI-ProteinID: XP_008245583
LinkDB
Position
Unknown
AA seq 124 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQ
YVKRFSRYKNPDAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKVSCAHFL
LWCL
NT seq 375 nt   +upstreamnt  +downstreamnt
atgtctggagaagaagaagaaaatgccgccgagctcaaaatcggagacgagtttttgaaa
gccaagtgcttaatgaactgcgaagttgcgttgattcttgaacataagtacgaccagctt
cagcagatgtctgatgaccccagaaaccaagtttctcaagtatttgagaagtcgctgcag
tatgtgaagcgctttagccgttataaaaatcctgatgctgtcaaacaagttagagaaatt
ctgagcagatatcaactgactgagtttgagctttgtgttcttggcaatctctgccctgaa
actgttgaggaagctattgctatggtaccatctataaaggtatcttgtgcccactttttg
ttatggtgcttatga

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