Prunus mume (Japanese apricot): 103344160
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Entry
103344160 CDS
T03196
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103344160
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103344160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
RPAP3_C
TPR_8
TPR_BSK1_C
TPR_11
TPR_12
TPR_16
TPR_9
TPR_CcmH_CycH
HAGH_C
ANAPC3
Coatomer_E
TPR_15
BTAD
Motif
Other DBs
NCBI-GeneID:
103344160
NCBI-ProteinID:
XP_016647749
UniProt:
A0ABM1LK22
LinkDB
All DBs
Position
LG1:complement(23481956..23486741)
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AA seq
547 aa
AA seq
DB search
MARAPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQDSHQEKLKTRDLGTSSGNYD
YSRNLDSINTMSSSFTSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY
ANRAMAYIKIKSFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFALRL
EPQNQEIKKQYTEAKSLYEKTILQKTSGARKNSVQEMQKVGKLDTKGNEYFKQKKFKEAI
DCYSRSIALSPSAVAYANRAMAYIKIKSFREAEDDCTEALNLDDRYIKAYSRRATARKEL
GKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYEKTILQKTSGARKNSVQEMQKVGKLD
TKVNGQSIQPVSSSAQITEMTAVQDHTKRNNTTRKQEVKASVQELASRAASRVKAVAAEK
ITPPNSAYQFEVSWRGLAGDNAGQTSLLKAISPSALPQIFKNALTVPILLDIIKCVATFF
IEEIDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWDEVFDNEATPIEYAEKLDNLH
TKYCPKR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccagagctccaaataagcacggtcgcgatcaagctctggatttccaggggtttttg
agtgacttgcaggactgggagctttctctcaaggacaaggacaaaaaaatgaggccacaa
gattcacaccaggaaaagctgaagactagagatttaggaactagttcggggaattatgac
tactcgaggaatttagattcaatcaatacaatgtcaagtagtttcacttcggaagatagt
cttcctgatgctgcttcagagaaagaattgggtaatgagtattttaagcagaagaagttt
aaggaagctattgactgctattcaagaagcattgctttgtctccgtctgcagtagcttat
gcaaatagagcaatggcatatataaaaatcaaaagtttccgggaagctgaggatgactgt
actgaggccttgaatttggatgatcgttatataaaagcatactcacgacgtgcaacggct
agaaaagaacttggaaaacttaaagaatcaattgaagatgctgagtttgccctgaggttg
gagcctcagaaccaagaaatcaagaaacaatacactgaggccaaatctttgtatgagaaa
acaattcttcagaagacatctggagcacggaaaaattctgtacaagaaatgcagaaagtg
ggaaagttggataccaaaggtaatgagtattttaagcagaagaagtttaaggaagctatt
gactgctattcaagaagcattgctttgtctccgtctgcagtagcttatgcaaatagagca
atggcatatataaaaatcaaaagtttccgggaagctgaggatgactgtactgaggccttg
aatttggatgatcgttatataaaagcatactcacgacgtgcaacggctagaaaagaactt
ggaaaacttaaagaatcaattgaagatgctgagtttgccctgaggttggagcctcagaac
caagaaatcaagaaacaatacactgaggccaaatctttgtatgagaaaacaattcttcag
aagacatctggagcacggaaaaattctgtacaagaaatgcagaaagtgggaaagttggat
accaaagtgaatggacaaagcatccagcctgtctccagcagtgctcaaataacagaaatg
actgcagttcaagatcacactaagagaaataacacaactaggaagcaagaggtgaaggca
tcggtacaagagcttgcttctcgagctgcttcccgagtcaaggctgtagctgcagaaaag
atcacaccaccaaattcggcatatcaatttgaggtttcttggcgaggactcgctggagat
aatgctggacagactagcctgttgaaggctatatctccaagtgcattgccgcagatattc
aaaaatgctttgactgttcccatacttcttgacattatcaagtgtgtggcaacctttttc
attgaagaaatagatttggccgttaattatttggagaacttaaccagggttccaagattt
gacacactcatcatgtttctttcatcctcagacaacgctgatcttgttaagatatgggat
gaagtgtttgacaatgaggcaactccaattgagtatgccgagaagcttgataacctgcat
acaaagtactgccccaagcgatga
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