Prunus mume (Japanese apricot): 103344178
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Entry
103344178 CDS
T03196
Name
(RefSeq) rho GTPase-activating protein gacHH-like isoform X2
KO
K20285
Rab9 effector protein with kelch motifs
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103344178
Membrane trafficking [BR:
pmum04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103344178
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_4
Kelch_3
Kelch_1
Kelch_5
Kelch_6
Kelch_2
GAPES1
Motif
Other DBs
NCBI-GeneID:
103344178
NCBI-ProteinID:
XP_008246027
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All DBs
Position
LG1:complement(23493462..23497293)
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AA seq
654 aa
AA seq
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MGSLPGETARKKAMWLYPKVTGLNPSERWGHSACYARGVLYVFGGCCGGMHFSDVLMLNL
ETMVWNTLASTGQGPGPRDSHSAVVLGHRMIVFGGTNGSKKVNDLHILNLVTKEWTRPEC
TGTPPSPRESHTATLVGDEKLVVFGGSGEGKGNYLNDLHVLDLNTMRWTSPEVKSDIPVP
RDSHSSLAIGKKLLVYGGDRGDRYYGGIDVFDMDTLTWSRLAVQGSSPGARAGHAAVSVG
TKVYVIGGVGDKHYYNDVWVLDVSTCSWTQLDICGQQPQGRFSHTAVVTDSDIAVYGGCG
EDERPLNELLVLQLGAEHPNGRYNISMCKIFGSHWNQERRRLSKGADFNTKTMLMGNHVV
VRETAEPESEAKRSLQNKSDSTLHPKRRRTTGTKAWDVESEQEEHSLSLSQHSSPSHSDQ
EQTPNPRIVDSAPGSQGFNLFKKKIQSPRNSQSPNALSNCKDLRNSVQKSPNLNLLGDHQ
TELKREQHPHVSTGRPIMQYPAVEQKTYEAVPVQNLIGAEVQGKVDGAFDSGFLMTATVN
GRLYRGVLFAPGAGIISRVPTVAQSTSSSTSQIPIAIAQPFPNPNRTEPPLKLSEQPMKN
SMPGSGLGLRQPQVARPFSVIRATSSLAKENNLTSDLPGVFLSLGGPGSGSGGS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggggtctttgccaggtgaaactgcaaggaagaaggcaatgtggctctatccaaaggtt
acgggattaaatccttctgagagatgggggcactctgcttgctatgctcgtggggttttg
tatgtttttgggggatgttgtggaggtatgcatttcagtgatgttcttatgcttaatctt
gaaacaatggtctggaacactcttgcatcaactggtcaagggcctggtcctagagacagc
catagtgccgttgttctagggcacaggatgatagtttttggaggtacaaatggctctaag
aaggtaaatgatcttcatatattgaatcttgtgaccaaagaatggacacgaccagaatgt
acggggactccaccttcaccccgtgaaagccacactgccacgcttgttggtgacgaaaaa
ttagtggtatttgggggtagtggagaaggtaaaggaaattacttgaacgatcttcatgtt
ctagaccttaataccatgagatggacttcccctgaggtgaagagtgatattcctgttcct
agagatagtcatagttctctagcaataggaaagaagcttcttgtgtatggtggagaccgt
ggtgataggtattatggcggcattgatgtgtttgacatggacacactgacttggtcaagg
ttggctgttcaaggatcttcacctggtgccagggctggccatgcagctgtgagtgtcggg
acaaaggtctatgtcattggaggggttggagacaaacattactacaatgatgtttgggtc
ctagatgtgagtacttgttcatggacccaacttgatatatgcggccaacagccacaaggg
cgattctctcacactgctgttgttacagattctgacattgctgtctatggagggtgcggg
gaggacgagcgccctctgaatgagttgctggtgttgcagcttggagcagaacatcccaat
ggtcgttacaatatttccatgtgcaaaattttcggaagccattggaaccaagagaggaga
aggctctctaaaggagcagattttaacacgaaaactatgctgatggggaaccatgtagta
gtaagagaaacagctgaaccagaatcagaagcgaaacgatctctccaaaacaaatcagat
agtactttacatccaaaaaggagaagaaccaccggtacaaaagcatgggacgtcgagtca
gaacaagaggagcattctctatcactctcccagcattcatcaccatcacactctgaccaa
gaacagacaccaaatcctagaattgttgattcagccccaggttctcaaggttttaatttg
tttaagaaaaaaattcagagtccgagaaatagccaatctcccaatgctttaagtaactgt
aaagatcttagaaattctgttcaaaaatctccaaaccttaacttgttaggagatcatcaa
accgaactaaaacgagaacagcatcctcatgtcagcactggcagaccaattatgcaatat
ccagctgtagagcagaaaacttatgaggcagtgcctgttcagaacctgattggcgccgag
gttcaaggcaaagttgatggagcatttgactcaggtttcttaatgacagcaactgttaat
ggaaggctatatagaggggtcttgtttgcaccaggagctgggatcatctcaagagtgcca
actgttgcacaaagcacttcatcttcaacaagccaaatccccattgccattgcccaacca
ttcccaaacccgaaccgcacagagccacccttgaagctatccgagcagccaatgaagaat
tccatgccagggtcaggtttaggcctcaggcaacctcaggtggctcgaccattttcggtc
attcgagccacttcatccttagccaaagaaaacaaccttacaagtgatcttcctggtgtg
tttttgtcacttggaggaccaggaagtggttctggtggatcttag
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