KEGG   Prunus mume (Japanese apricot): 103344672
Entry
103344672         CDS       T03196                                 
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03420  Nucleotide excision repair
pmum03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    103344672
   03460 Fanconi anemia pathway
    103344672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103344672
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103344672
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HRDC HHH
Other DBs
NCBI-GeneID: 103344672
NCBI-ProteinID: XP_008246508
LinkDB
Position
LG1:complement(24715379..24718576)
AA seq 416 aa
MEDEHGGQNTESDQNKNKKKTVIKIPSFQEVLESSQSKSTPQSLFTPSQSFSQAFAFVKS
SEFYSPPPPPATSSQPLQASDTGNSSKTGQSDVPSSSAPTNAVASSSSPAQRRNAIIVSH
RQFYYFQLRVKSNSSMQKGNPLLKHIRNVRWEFADIVCDYLLGQSSCALYLSLRYHLLHP
DYLYYRIRELQKNFKLRVVLCHIDVEDVVKPLLEVTKTALLHECTLLCGWSLEECGRYLE
TIKVYENKPADIIQGQMDTDYLSRLNHALTTVRHVNKTDVVTLGTTFGSLSHIMDVSMED
LARCPGIGERKVKRLYDTFHEPFKRVVASRPAVPETSAPSNAEPGSVDEEDKEAEETEDE
SKRRKKEPELTVKSALSVAFSKYADKVNKKNSKTQREEKGETSAAMEAETEEMRSK
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggaagacgaacacggagggcaaaacacagagtcagaccaaaacaaaaacaagaagaag
acagtgataaaaataccatcttttcaagaagttcttgagagttcacagtcaaaatcaacc
ccacagtctctgttcactccttcacagagcttttctcaagcctttgccttcgtcaagtcc
tctgagttctactcgcctcctcctccccctgccacctcctcgcaacccctacaggcctca
gacaccggtaattcaagcaaaactggtcaatctgatgttccatcatcatctgctcctaca
aatgctgttgcatcatcatcatcacctgctcagcgtcgcaatgcaattattgtgagccac
agacagttctactattttcaactccgtgtaaaatctaattcctccatgcagaagggaaat
cccttgctcaaacatattagaaatgtgaggtgggagtttgcagatattgtttgtgactac
ttacttggacaaagctcatgtgctctctatctaagtcttcggtatcatctgctgcatcca
gactacctatattaccgtataagagaattgcaaaagaatttcaagcttcgtgttgttctt
tgccatattgatgtggaggatgtagttaagcctttacttgaagttactaaaactgctctg
cttcatgaatgcaccctattatgtggttggagcttggaggaatgtggtcgctacttggag
accataaaagtttatgaaaacaagcctgctgacattattcaaggtcaaatggatacagac
tatttatcacggctaaatcacgcgttaacgacagttcgacatgttaacaagactgatgtt
gtcacccttggtactacgtttgggtctctttctcatatcatggatgtttcgatggaagat
ctagctcgttgccctgggattggagagcgcaaggtaaaacgtttgtatgatacatttcat
gaaccatttaagcgtgtggttgccagccgccctgctgttccagaaacctctgccccaagc
aatgctgaacctggttcagtggatgaagaagataaagaagcggaggaaacagaagacgaa
agcaaacgcaggaagaaagaaccagaattgactgttaagtcagccttgtctgttgccttt
tccaaatatgctgataaagttaataaaaagaacagcaagacacaaagagaggaaaaagga
gaaacaagtgctgccatggaagctgaaactgaagagatgagatcaaagtga

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