Prunus mume (Japanese apricot): 107881004
Help
Entry
107881004 CDS
T03196
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107881004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
107881004
03036 Chromosome and associated proteins [BR:
pmum03036
]
107881004
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107881004
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
107881004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
107881004
NCBI-ProteinID:
XP_016649279
UniProt:
A0ABM1LPF2
LinkDB
All DBs
Position
LG4:23787844..23789956
Genome browser
AA seq
356 aa
AA seq
DB search
MGASRSSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLREQYPNQV
EIVQLDDSNGEIRSDPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISGEDE
ESDSSSSSSVELKSLLNGNKSSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIEREAV
DTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGW
NKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDS
QALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagtaggagtagcgatccgaatcaggacgggtcagatgagcagcagaaacga
tcggagatctacacgtatgaggcgccatggcacatctacgccatgaactggagcgtccgt
cgggacaagaagtaccggctggccatcgcaagcctccgggagcagtatccgaaccaagtg
gagatcgtgcagctggacgactcaaacggggagatccggtcggaccccaacctgtcgttc
gagcacccgtacccgccgaccaagaccatcttcatcccggacaaggagtgccagaagcca
gacctgttggccacctcgagcgatttcctccgcgtgtggcgcatctccggggaggacgag
gagtctgattcctcctcctcctcgtcagtggagctcaagtccctcctcaacggcaacaag
agctccgagttctgtgggcccctcacctccttcgactggaacgaggcggagcccaagcgt
atcggcacctcctctatcgacactacctgcactatctgggacatagagcgcgaggcggtg
gacacccagctcatcgcccacgacaaggaggtctacgacatcgcctggggcggcgttggt
gtcttcgcctccgtctcggcagacggctccgtgagagtgttcgacctgcgcgacaaggag
cactcgaccatcatctacgagagttcggagcccgacacccccctggtccggctgggatgg
aacaaacaagaccccaggtacatggccaccatcatcatggacagcgccaaggtggtcgtc
ctggacatccgcttcccgaccctcccagtcgtcgagttgcagaggcaccaggccagcgtc
aacgccattgcctgggcccctcacagctcttgccacatctgcactgccggagatgactcc
caggctctcatctgggacctctcctccatgggccagccggtggagggtggcctggatccc
attctggcctatacggccggggccgaaatcgagcagctgcagtggtcctcttcccagccc
gattgggttgcaattgccttctccaccaagcttcagatactcagagtatga
DBGET
integrated database retrieval system
