KEGG   Prunus mume (Japanese apricot): 18668064
Entry
18668064          CDS       T03196                                 
Symbol
rpoA, CP95_p034
Name
(RefSeq) RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    18668064 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmum03021]
    18668064 (rpoA)
   03400 DNA repair and recombination proteins [BR:pmum03400]
    18668064 (rpoA)
Enzymes [BR:pmum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     18668064 (rpoA)
Transcription machinery [BR:pmum03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     18668064 (rpoA)
DNA repair and recombination proteins [BR:pmum03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      18668064 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 SAM_2
Other DBs
NCBI-GeneID: 18668064
NCBI-ProteinID: YP_009020071
UniProt: W8GSI8
LinkDB
Position
Pltd:complement(79629..80609)
AA seq 326 aa
MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIPHEYSTIIGIQESVHEILMNLKEIVLRSNLYGTRNASICIKGPGYVTAQD
IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTPNNFQDGSYPIDAVFMPVR
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALHDASRNLIDLFIPFLHAEEENLQLE
NNQHKVTLPLFTFHGRLAKQRKNKKEIALQYIFIDQSELFPRVYNCLKRSNIHTLLDLLN
NSQEDLMKIKHFRIEDVKHILNILEI
NT seq 981 nt   +upstreamnt  +downstreamnt
atggttcgagagaaagtaacagtatctactcggacactacagtggaagtgtgttgaatca
agagcagacagtaagcgtctttattatggacgctttattctggccccacttatgaaaggt
caagcagatacaataggaattgcgatgcgaagagctttgctcggagaaatagaaggaaca
tgtatcacacgcgcaaaatctgagaaaataccacatgaatattctaccataataggtatt
caagaatccgtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatcta
tatggaactcgtaacgcgtctatttgtatcaagggtcctggatatgtaactgctcaagac
attatcttaccaccttctgtggaaatcgttgataatacacagcatatagctaacctaacg
gaaccaattaatttgtgtattgaattacaaatcgagaggaatcgcggatatcgtataaaa
acgccaaataactttcaagacggaagttatcctatagatgctgtattcatgcctgttcga
aatgcgaatcatagcattcattcttatgtgaatgggaatgaaaaacaggagatacttttt
ctcgaaatatggacaaatggaagtttaactcctaaagaagcacttcatgacgcctcccgg
aatttgattgatttatttattccttttttacatgcagaagaagaaaacttacagttagaa
aacaatcaacacaaagttactttgcccctttttacttttcatggtagattggctaaacaa
aggaaaaataaaaaagaaatcgcattgcaatatatttttattgaccaatcagaattgttc
cccagggtctataattgcctcaaaaggtccaatatacatacattattggatcttttgaat
aacagtcaagaagatcttatgaaaattaaacattttcgcatagaagatgtaaaacatata
ttgaacattctagaaatataa

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