KEGG   Pedobacter mucosus: LOK61_00835
Entry
LOK61_00835       CDS       T08291                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pmuo  Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:pmuo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmuo03032]
    LOK61_00835
   03036 Chromosome and associated proteins [BR:pmuo03036]
    LOK61_00835
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmuo02048]
    LOK61_00835
Enzymes [BR:pmuo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LOK61_00835
DNA replication proteins [BR:pmuo03032]
 Prokaryotic type
  DNA Topoisomerases
   LOK61_00835
Chromosome and associated proteins [BR:pmuo03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LOK61_00835
Prokaryotic defense system [BR:pmuo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LOK61_00835
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c HATPase_c_3 DNA_gyraseB_C Tir_receptor_M
Other DBs
NCBI-ProteinID: UKT64334
LinkDB
Position
219684..221552
AA seq 622 aa
MAEVVYNDDSIRSLDWKEHIRLRPGMYIGKLGDGSAHDDGIYVLLKEIVDNSIDEFVMGS
GKTIEITVSEQKVNIRDYGRGIPLGKVIDCVSKINTGGKYDSNAFQKSVGLNGVGTKAVN
ALSTNFMVQSYRDGKTKKVEFSKGEIVSDQQIIDTTQRNGTSITFYPDETIFRNYHYIPD
FVESMVWNYVFLNTGLTVNFNNQKYFSERGLYDLLSKFNKPEEIRYPIIHLIGNDIEIAM
THGQQYGEDYHSFVNGQHTTQGGTHQAAFREAVVKTVREFYKKEFDASDVRSSIIAAISI
RVQEPVFESQTKTKLGSQNMGPEGPSVRTFIMDFVKKELDDYLHKHSDVADALLKRIIQS
ERERKDIAGIKKLANDRAKKASLHNKKLRDCKVHFNTTHEKRYESTLFITEGDSASGSIT
KSRDVDCQAVFSLKGKPLNCYELTKKVVYENEEFNLLQHALNIEDGLDGLHYNNIVIATD
ADVDGMHIRLLMMTFFLQFFPDLVKAGHVYILQTPLFRVRNKKETIYCYSDEERRGAIEK
LGNKPEITRFKGLGEISPDEFGLFIGKDIRLDPVILKDQTIKSLLEYYMGKNTPDRQQHI
IRNLRVEKDEIGAEPKIIEDVA
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggcagaagtagtttataatgatgacagtattcgatcgctagactggaaagaacacatc
agattacgcccaggaatgtatattggcaagctaggagatggatctgcacatgatgatggt
atttatgttttattgaaagaaattgttgataactctatcgatgagtttgtgatgggaagt
ggaaaaaccattgaaataaccgtttctgaacaaaaagtaaacattagagattacggtcgc
ggtattccattgggaaaggttatagattgtgtgagcaaaataaatacaggtggtaagtac
gatagtaatgcgtttcaaaaatctgttgggttaaatggggttggtacaaaagcagtaaat
gcactttctacaaactttatggtacaatcttaccgtgatggaaaaacgaaaaaagtggag
ttttctaaaggtgaaattgttagtgatcaacaaataattgatactacgcagcgcaatggc
acatcgattaccttttatcctgatgaaaccatttttagaaattaccattatattccagat
ttcgtagaaagtatggtttggaattatgtgtttctaaacactggtttaactgtaaatttt
aacaaccaaaaatatttctcggagcgtggtctttatgatctgctttcaaaatttaataag
ccagaagaaattcgttatcccattattcatttaattggaaatgatatcgaaattgccatg
actcatggtcagcaatatggtgaggattatcattcatttgttaatggacaacatactaca
caaggcggaacgcatcaggcagcatttcgtgaagcggttgtaaaaaccgttagggaattc
tataaaaaggaattcgatgcttcagatgttcgatcttcaatcattgcagcaatttctatt
cgtgtgcaagaaccagttttcgaatctcaaaccaaaaccaaattgggttcgcagaacatg
ggtccggaaggtccgtcggttcgaactttcatcatggattttgtgaagaaagagctggat
gattatttgcataaacacagcgatgttgcggatgcgcttttgaagcgaatcattcaatcg
gagcgggaacgaaaagacatcgccggaattaaaaaattagcaaatgatcgtgctaaaaaa
gcttccttgcacaacaaaaaacttcgtgattgtaaggttcattttaatacgacacatgaa
aaaagatatgaatctacattgtttattacggaaggagattctgcttcaggttcgattaca
aaatctcgtgatgtagattgtcaggccgtatttagcttaaaaggtaaaccacttaattgt
tatgagttaaccaaaaaagtggtttatgaaaacgaagaatttaatctgttacaacacgct
ttaaatattgaagatggtttagatggattgcattacaacaatatcgttatcgctacagat
gctgatgttgatggcatgcatatccgtttgttaatgatgacgttctttcttcagtttttt
cctgatttggttaaagctggtcatgtttatattttgcaaacgccgctttttagggttcga
aataaaaaagagactatttattgttatagtgatgaggagcgaagaggtgctattgaaaaa
ttaggtaataagcctgagattactcgttttaaaggtctaggtgagatttctcctgatgag
tttgggttatttattggaaaagatatcaggcttgatccagttattttaaaagatcaaacg
attaaaagtttgttggaatattacatgggaaaaaatacgccagatagacagcagcatatc
atcagaaaccttcgtgttgaaaaagatgagataggagcagagcctaaaattattgaagat
gttgcttaa

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