Pedobacter mucosus: LOK61_01860
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Entry
LOK61_01860 CDS
T08291
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_01860
Enzymes [BR:
pmuo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
LOK61_01860
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
LOK61_01860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
SMRP1
Motif
Other DBs
NCBI-ProteinID:
UKT64533
LinkDB
All DBs
Position
complement(442145..443701)
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AA seq
518 aa
AA seq
DB search
MDKIKKAPNVLRLILGDQLNIKHSWFKTVDKNVLYVLMEIRSETDYVWHHIQKVLGFFAA
MRHFAEELKVSGHQLKYIHLSDEGNLQSFEKNLIQIIRDYNITHFEYQLPDEYRLDEEFK
SICNKLLISSKVYDTEHFFSTRTELANFFDGKKNYLMENFYHYMRKKHHILMDNDSQPVT
GKWNYDIENRKKIPSKHVATSPYIFENDLSDIYEEIKKTDIVTIGTVNPTNFIWPITRAQ
CLKVLKFFITECLPLFGTYQDSMTPNDWSLYHSRISFAMNSKMISPLEVVNAAIEEWKKH
PDEIGFNQLEGFVRQIIGWREYMRGMYWLNMPDFETTNFFNNKNKLPDWYWTGKTKMNCL
KYAIGQSLNFAYAHHIQRLMVTGNFALLAGTDPDEVDQWYLGIYIDAIQWVEITNTRGMS
QFADGGMIGTKPYVSSASYINKMSHYCGTCYYDKDKKTGDKACPFNSLYWNFYDQHSAKL
SKNPRIGMMYKIWDKMQPEKKSELLNQAKYYLENINDL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattaaaaaagcaccaaatgtattgcggttgatacttggcgatcagctcaat
attaaacattcatggtttaaaaccgttgataaaaatgttttatatgttttgatggaaatt
agatcagaaaccgattatgtttggcaccacattcaaaaagtattgggattttttgcagcc
atgcgacattttgcagaagaacttaaagtctccggacatcagctaaaatacatccatcta
agtgatgaaggaaatcttcaatcttttgaaaagaatcttattcaaattattcgtgattat
aacataacacattttgaatatcaattaccagatgaataccgcttggatgaggaatttaaa
agtatttgtaataaattattaatctcctctaaagtttacgatacagaacatttctttagt
acaagaacagaacttgctaatttttttgatggtaaaaaaaattacctaatggaaaatttt
tatcattatatgcgtaagaaacaccatattttgatggataatgacagtcaaccggttaca
ggtaagtggaattacgatatcgaaaatagaaaaaaaattccttcaaaacatgttgcaact
tctccgtatatttttgaaaatgatttaagtgatatttatgaagaaattaaaaaaacagac
attgtaacgattggaaccgtaaatccgaccaattttatctggccaataactagagcgcaa
tgtttaaaagtgctaaaattttttataactgaatgccttccattatttggaacttatcag
gattcgatgacgccaaatgattggtcgttataccattctagaatatcatttgcgatgaat
tctaaaatgatttctccattagaagtggtaaatgcagctattgaagaatggaaaaagcat
cctgatgaaataggttttaatcaactagaaggttttgtaaggcaaattattggctggcga
gaatacatgcgtggaatgtattggcttaatatgcctgattttgaaacgaccaactttttc
aataataaaaataaattacctgattggtattggaccggtaaaacgaaaatgaactgttta
aaatatgctatcgggcaatctttaaactttgcttatgcgcatcatatccaacgattaatg
gttactggaaatttcgcattacttgctggcaccgatccagatgaggttgatcaatggtat
ttagggatttatatcgatgctatacaatgggtagaaattaccaacacaaggggaatgagc
cagtttgccgatggtggcatgatcggaacaaagccttatgtaagttcggcttcgtatatt
aataagatgagtcattattgtggaacttgctattatgataaagacaaaaaaacaggcgat
aaggcttgcccttttaatagcctgtattggaatttttatgatcaacattcagcaaaactt
tccaaaaacccacgtattggaatgatgtataaaatttgggataaaatgcagcctgaaaaa
aaatcagagttattaaatcaggctaaatattacttggaaaatatcaacgatttatga
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