Pedobacter mucosus: LOK61_03595
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Entry
LOK61_03595 CDS
T08291
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmuo01002
]
LOK61_03595
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmuo01011
]
LOK61_03595
Peptidases and inhibitors [BR:
pmuo01002
]
Cysteine peptidases
Family C82
LOK61_03595
Peptidoglycan biosynthesis and degradation proteins [BR:
pmuo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LOK61_03595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
NIR_SIR
Motif
Other DBs
NCBI-ProteinID:
UKT64860
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All DBs
Position
805857..807254
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AA seq
465 aa
AA seq
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MDSLSSNFVNPKTIKSYYNHKNSEPRFVTKFYIDGELDSLANYLQNSTVHGLNPKLFKTD
ELKSLLQVLTANKFKSVNESYPVIAKLEILSANAYLNYTNYLKFGVVNPRSIFSRYYIKV
KRPDSLGMQKILNAENILDTLKAVQPKSEQYKLLQKAYMATFTESEKRILWLNMERFRWQ
MPETSDNYVQVNIPDFRLTWIDKSDTLITMKVCVGGKREEGYEEKMKMFAKSGNLDDKPK
NHETPLLFSKINSIQANPIWNIPVSIAQSEIYWMARKDPYYLSNSNIKVYYKDKVINEPD
TINWSRYSRDKLPFKFKQGSGGGNALGKFKFIFDNSSSIYLHDTNAKNGFNLTNRALSHG
CVRIEKPLEFAELLVKDSYTYDKLRAEVDLPPVDSTHNKWYKKRMAAKADTTKSFQLKPA
WFGPKKAVPLFITYITAWSQNDKIEYRPDVYGLDEKLWAATKKFR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttgtcaagtaactttgtaaatcctaaaactataaaatcttattacaaccat
aaaaattctgaaccaagatttgtaacaaaattttacatcgatggtgagcttgattcttta
gcaaattacttacagaatagtacagttcatggtttaaatccgaaattatttaaaacagat
gagttaaaaagtttactgcaagtgcttactgcaaataaatttaaatcagttaatgagagt
tatccagttatcgccaagctggaaatattaagtgcaaatgcgtatttaaattatacaaat
tatttaaaatttggtgttgtaaatcctcgaagtattttttccagatattacataaaagtg
aaacgccctgatagtttggggatgcaaaaaatattaaatgcagagaatatacttgatact
ttaaaggctgttcaaccaaaatcagaacagtataaattgcttcagaaagcttacatggct
acttttacggaaagtgaaaagcgaattttgtggcttaacatggagcgtttccgttggcaa
atgcctgaaactagtgataattatgttcaagtaaatattccggatttcaggttaacgtgg
atagacaaaagtgataccttgatcacgatgaaggtttgcgttggcggaaagcgagaagag
ggttacgaagaaaagatgaagatgtttgcaaagtctggcaatttggatgacaaaccaaaa
aaccacgaaaccccattactatttagtaaaataaattctatccaggcaaacccaatttgg
aatattccggtgagtattgcgcaaagtgaaatttattggatggcaagaaaagatccatac
tatttatcaaatagcaacattaaggtttattacaaagataaagtgatcaatgagcctgat
accataaattggagcaggtattcgagagataaattgccttttaaatttaaacaaggttct
ggcggaggtaatgcgttgggtaaattcaaattcatatttgataatagttctagcatttat
ttacacgataccaatgcaaaaaatgggtttaatttaaccaaccgagctttaagtcatggt
tgcgttcgaattgaaaaaccattagaatttgcagagctgttggttaaagattcttatact
tatgataagcttcgggccgaagttgatttacctcctgttgatagtacacacaataaatgg
tataaaaaacgcatggctgcaaaggcggatactactaaatcttttcaattaaaacctgct
tggtttggtccgaaaaaggctgttcctttatttattacctatattacggcttggtctcaa
aatgataaaatagaatatcggccagatgtttatggtttagatgaaaaactatgggcagca
actaaaaagtttagatag
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