Pedobacter mucosus: LOK61_05045
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Entry
LOK61_05045 CDS
T08291
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LOK61_05045 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmuo01007
]
LOK61_05045 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmuo03016
]
LOK61_05045 (lysS)
Enzymes [BR:
pmuo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LOK61_05045 (lysS)
Amino acid related enzymes [BR:
pmuo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LOK61_05045 (lysS)
Transfer RNA biogenesis [BR:
pmuo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LOK61_05045 (lysS)
Prokaryotic type
Other AARSs
LOK61_05045 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UKT65146
LinkDB
All DBs
Position
complement(1201772..1203481)
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AA seq
569 aa
AA seq
DB search
MSIGLSEQEILRRESLKQLRELGIEPYPAESFEVNAYAADILANYDIDKTAYKTVILAGR
IMSRNIMGAASFTELQDSTGRIQIYLKRDELCPGEDKTLYNTVFKKLLDIGDFIGVKGYV
FTTQTGEISVHVTEFKVLAKSLRPLPVVKRDDEGNVYDGFTNPELRYRMRYVDLTVNPDF
KQIFIKRSKVINSMRNYFDEQGWMEVETPILQPIHGGAAARPFATHHNTLDMPLYLRIAN
ELYLKRLIIAGFDGVYEFGKMFRNEGMDRTHNPEYTSMEIYVAYKDYIWMMAMVEECLEK
VAIATNGTSVVKVGEHEINFEGPYEKLTMYESIQKYTGIDVSAMTEDQLAQTCKELGIEI
DSTMGRGKLVDEIFSDKVEANLIQPTFITDYPIEMTPLAKKHRTKDGLVERFEIFVNGKE
IGNAYSELNDPIDQKERFEDQLKLSARGDAEAMAMDDDFVRALEYGMPPTSGLGFGIDRI
VMLMTNQSTIQEVLFFPQMRPEKKKIELTPEETELYSLVSDGEQYLLTAIKEKLVDWSNK
KWDITLKALTAKGILKVSKTDDGLFISQK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtataggattatcagaacaagaaatattgcgacgtgagtcgctaaaacaattgcgt
gagttaggtatagagccatatcctgctgaatcttttgaggtaaatgcttacgcagcagat
atattagcaaactacgatattgataaaaccgcatataaaactgtaattttagctggaaga
attatgagccgtaatattatgggcgctgcttcttttactgaattacaagattctacagga
agaattcaaatctacttaaagcgtgatgagctttgtccgggtgaagataaaaccttgtac
aatactgtatttaaaaaattattagatattggtgattttataggagttaaaggctatgtt
tttactacacaaactggtgagatatctgtacacgtaacagaatttaaagttttagcgaaa
tctttacgccccttacctgttgtaaaacgcgatgatgaaggtaatgtttacgatggcttt
acaaaccctgagctgcgttacagaatgcgctatgttgatttaacagtaaatcctgatttt
aaacaaatttttatcaaacgcagcaaggtaattaattccatgcgcaattattttgatgag
caaggttggatggaagttgaaacaccaattcttcagcccattcatggtggagcagcagct
cgtccgtttgcgacgcatcacaacactttagatatgccgctttatttgcgtattgcaaat
gaattgtacctaaaaagattaattattgcaggtttcgacggtgtttatgaatttggaaaa
atgtttcgtaatgaaggcatggaccgcacccataaccctgaatatacttcaatggaaatc
tatgtggcttacaaagattatatctggatgatggctatggttgaagaatgtttagagaag
gtagcaatcgcaacaaatggtacttcggtagttaaggttggtgagcatgaaattaatttt
gaaggaccatacgagaaactgaccatgtatgaatccattcagaaatataccggaattgat
gtttcggcaatgactgaagatcaacttgcacaaacttgtaaagaactcgggattgaaatt
gattctactatgggtcgtggtaaattagtagatgaaatttttagtgacaaggttgaagct
aatttaattcaaccaactttcattacagattacccaatagaaatgacgccacttgcaaaa
aaacatcgcactaaagatggtttggtagagcgttttgaaatttttgtgaatggtaaggaa
attggtaacgcttattctgaattaaacgatccaatagatcaaaaagaacgttttgaagat
caattgaaattatccgctcgtggcgatgctgaagcaatggctatggatgatgatttcgtt
cgtgctttagaatatggaatgcctccaacttcaggtttaggttttggtattgacaggatt
gttatgcttatgactaatcaaagtactatacaagaggtattatttttcccgcaaatgcgc
cctgagaaaaagaaaattgaattgacacctgaagaaactgaattatactcgcttgtttct
gatggagaacaatatcttttaacagcgataaaagaaaagctagttgattggagtaataaa
aagtgggatataacactgaaagcattaactgccaaaggaattttaaaagtttcaaaaact
gatgatggcttatttatttcgcagaaataa
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