Pedobacter mucosus: LOK61_05990
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Entry
LOK61_05990 CDS
T08291
Name
(GenBank) endonuclease
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOK61_05990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_05990
Enzymes [BR:
pmuo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LOK61_05990
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOK61_05990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fapy_DNA_glyco_C
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
UKT65330
LinkDB
All DBs
Position
complement(1431781..1432518)
Genome browser
AA seq
245 aa
AA seq
DB search
MPEGPSIIILKDLIKDLDLHKPEIIEVAGNLEDKLKDRLLHQHIQSFKSWGKHFLICFKD
FTLRIHFMLFGTYLINDRKKNTLKLGLTLPKDELNFYNCKIDILEGDIDDHYDWSVDIMA
DHWDEKAALEKLKQLPESFVCDVLLDQQIFAGSGNIIKNEVMYRVGVHPLTKIKDLPAKK
LKDLVKEIRKYSFDFLKWKSVNKLSEHWEVYLQKTCPFGHKINKEKLGKTHRQTYYCSKC
QKLYN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggtccatcgattataatattaaaagatttaataaaagatcttgatttacat
aaaccagaaattatagaagtagccggaaacttggaagataagctgaaagatagattatta
catcagcatatacaatcttttaaaagctgggggaagcattttctaatttgctttaaggat
tttactttacggattcattttatgctttttggcacctatttaataaacgacagaaagaaa
aatactttaaaacttggccttactctgccaaaagatgaactcaatttttacaattgtaaa
atagatattttggaaggtgatattgatgatcattatgattggagcgttgatattatggct
gatcattgggacgagaaagctgctcttgaaaaacttaaacaactgcctgaatcctttgta
tgtgatgttttattagatcaacaaatatttgcgggatctggaaatataattaaaaacgaa
gtgatgtacagagttggcgtgcaccctttaaccaaaataaaggatttgcctgcaaaaaag
cttaaggatttagtaaaggaaattagaaagtacagctttgattttttgaaatggaaaagc
gttaacaaattaagtgaacactgggaagtttatcttcagaaaacatgtccgtttggacat
aagataaataaagaaaaattaggaaagacacacagacaaacttactactgttctaaatgt
cagaaactgtacaactaa
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