Pedobacter mucosus: LOK61_06085
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Entry
LOK61_06085 CDS
T08291
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pmuo
Pedobacter mucosus
Pathway
pmuo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOK61_06085 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_06085 (ruvB)
Enzymes [BR:
pmuo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOK61_06085 (ruvB)
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOK61_06085 (ruvB)
RecFOR pathway proteins
LOK61_06085 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
TIP49
Mg_chelatase
nSTAND3
AAA_16
NB-ARC
TsaE
AAA_PrkA
RNA_helicase
AAA_14
Rad17
Sigma54_activ_2
NPHP3_N
AAA_18
AAA_33
Bac_DnaA
NTPase_1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UKT65348
LinkDB
All DBs
Position
complement(1452227..1453249)
Genome browser
AA seq
340 aa
AA seq
DB search
MNENLDPEASNLSPTDKDIERVLRPQAFEDFTGQEKVMANLKIFVQAAKLRGEALDHVLL
HGPPGLGKTTLSYIIANEMGSGIKVTSGPVLDKPGDLAGLLTGLDTGDILFIDEIHRLSP
LVEEYLYSAMEDFKIDIMLESGPNARSVQITLNPFTLVGATTRSGLLTAPLRARFGINCR
LAYYDAKLLTTIVLRSSDILNTPINDEGAYEIARRSRGTPRIANALLRRTRDFAQIKGNG
NIDTEIARYALNALNVDEHGLDEMDNKILVTIIDKFKGGPVGLKTIATAVGEDEGTIEEV
YEPFLIQEGYIMRTSRGREVTEAAYKHLKRNYPGQLGKLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaatctagatcccgaggcttcaaacttaagtcctaccgacaaggatattgag
cgggttttaaggccgcaggcctttgaagattttactggtcaggaaaaagtaatggccaat
ttaaagattttcgttcaagcagctaaacttcgtggtgaagctttagatcatgtattactt
catggccctccaggattaggaaaaacaactctttcatatattattgctaatgaaatgggt
tctggaattaaggttacctctggtcctgttctagataaacctggtgatttagccggatta
ttaactggtttggatacaggtgatattctttttatagatgaaatccatcgtttatcacct
ttggtggaagaatatctttattcggctatggaagattttaagattgatattatgcttgaa
tctggtccaaatgcccggtcagttcagattacgttaaatccttttacccttgttggcgct
acaacccgatctggtttgttaacagcacctttaagagctcgtttcggcattaattgtcgc
cttgcatattatgatgctaaactattaaccacaatcgttttacggtcttcagatattcta
aatacacctataaatgatgaaggtgcctatgaaatcgcccgtagaagtcgcggtacgcct
cgtattgcaaatgcacttttacgaagaaccagagattttgctcaaataaaaggcaacgga
aacattgatacggaaattgcccgatatgcattaaatgcattaaatgtagatgaacatggt
ttagacgaaatggataataagattcttgttaccataattgataagtttaaaggtgggcca
gttggtttgaaaacaattgctacagcggttggcgaagatgagggtactattgaggaagtt
tatgagccatttttgattcaggagggttacattatgcgcacctcaagggggagagaagta
accgaagctgcttacaaacatttaaagagaaactatcctgggcaattagggaaattgttt
tag
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