Pedobacter mucosus: LOK61_06840
Help
Entry
LOK61_06840 CDS
T08291
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmuo03036
]
LOK61_06840 (xerD)
Chromosome and associated proteins [BR:
pmuo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LOK61_06840 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
Motif
Other DBs
NCBI-ProteinID:
UKT65496
LinkDB
All DBs
Position
complement(1675157..1676056)
Genome browser
AA seq
299 aa
AA seq
DB search
MLWQSYINGFKSYLRLERSLSSHSVDAYLGDIDKLIQYYQSLDAEPKLTEVTVQDLKTFI
SWLNELGMQASSQARIISGLKAFFAFLMLEEVIIIDPTALIEGPKLSRTLPDTLNIHEIN
RLIDAIDASKPEGMRNKAIIEVLYGCGLRVTELTELKISNIYAQIEFIKVIGKGNKERLI
PIGGEALKLIDIYLKEIRVHASIKKGNEDFLFLNRFGAKLSRISIFNLVKSLAVLTGIKK
NISPHTLRHSFATHLIEGGADLRAVQEMLGHSSITTTEIYTHIDRDYLREVITQFHPRA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctttggcaatcatatattaatggatttaaatcttatttacgcttagaaagatcgctc
tctagtcattcggttgatgcttatttaggtgatattgataaattgattcaatattatcaa
tcgctagatgctgaacctaaactaaccgaagtaaccgtacaagatttaaaaacttttatt
tcctggcttaatgaattgggaatgcaagccagttctcaggctagaatcatatccggattg
aaggcttttttcgcatttttaatgctggaagaagttataataattgatcctaccgcatta
attgagggaccaaaactcagtcggacactgcctgatacactaaatattcatgaaataaat
agacttatagatgcaatcgatgcttcaaaacctgaaggcatgcgaaataaagcaattatt
gaggttttatatggatgtggcctaagggttacggagttaactgagttaaaaatttcgaat
atttatgctcaaatagaatttataaaagtaataggaaagggaaataaagaaagattgatt
cctattggtggcgaagctttgaaactgattgatatttatttaaaagagatcagagttcat
gcaagcattaaaaaaggcaatgaagactttttgtttttaaaccggtttggggcaaagctg
tccagaatttcgatatttaacttagttaaaagtttggcggttttaaccggaatcaaaaaa
aatattagtccgcacacgcttaggcattcgtttgcgactcatttaatagaaggaggtgca
gatttacgagccgttcaagagatgttgggtcattcgagtatcaccacaacagaaatttat
acacacatcgatcgggattatttaagggaggtgattacgcagtttcatccgagggcttaa
DBGET
integrated database retrieval system
