Pedobacter mucosus: LOK61_06905
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Entry
LOK61_06905 CDS
T08291
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pmuo
Pedobacter mucosus
Brite
KEGG Orthology (KO) [BR:
pmuo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmuo03032
]
LOK61_06905 (gyrA)
03400 DNA repair and recombination proteins [BR:
pmuo03400
]
LOK61_06905 (gyrA)
Enzymes [BR:
pmuo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LOK61_06905 (gyrA)
DNA replication proteins [BR:
pmuo03032
]
Prokaryotic type
DNA Topoisomerases
LOK61_06905 (gyrA)
DNA repair and recombination proteins [BR:
pmuo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOK61_06905 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UKT65509
LinkDB
All DBs
Position
1689724..1692324
Genome browser
AA seq
866 aa
AA seq
DB search
MAEDLENQQNDKIIRINIEEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMLDL
GVTSNKPHKKSARIVGEVLGKYHPHGDASVYFTMVRMAQDWSLRYPMVDGQGNFGHIDGD
SPAAMRYTEARFSKIAEEMLADINKDTVDFQLNFDDTLQEPTVLPAKIPNLLVNGSSGIA
VGMATNMAPHNLTEVIDGVVAYIDNSEITIEELMKFVKAPDFPTGGIIYGYTGVKEAFET
GRGRIVMRAKAEIEMVKEREVIIVTEIPYQVNKANMVERTAELVNEKKLEGISNIRDESN
KDGIRIVYEIKRDANASIVLNNLYKYTALQTSFSVNNIALVKGRPQMLNLKDLITHFVDH
RHDVIVRRTKYELAEAEKRAHILEGYLIALDHLDEVIKLIRASETPEEARLGLIENFSLS
DIQARAILDMTLRRLTGLERDKIKEEYAELMKTIEHLKLILADEGLRMQIIKDELAEIRL
KYGDERRTTIVHSAEDMSMEDFIADEEVVITISHEGYVKRTPATDFRAQGRGGKGSKGSN
SRNEDFIEHMLIASNHNYMLFFTEAGRCFWLRVYEIPEGSRTSKGRAIQNIINIPKEEKI
KAYIKVKNLKDQEYLENNFIIMCTKKGTIKKTSLEAYSRPRVNGINAININDGDVLLEAC
LTNGESEIVMALRSGRAIRFNEKTVRPMGRTATGVRGVRLAHDKDEVVGMIAVNNPEVTV
LVVSEKGYGKRTDIDDYRVTNRGGKGVKTLNVTEKTGQLVSIKDVTDLEDLMIINRSGIV
IRIPVSALRVMGRATQGVRLISLKGDDEIASVTKIDHEEDEVEAVDLEGVLVVDGEELEP
ATEDESAEADENDDADHNDNETEEEN
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatttagaaaatcagcaaaacgacaaaatcattcgaataaatattgaagaa
caaatgaaatcggcctacattgattattcaatgtcggtaattgtatcaagggctttgcct
gatgtacgcgatggattaaaaccagttcaccgccgtgttttatacggaatgcttgatctt
ggtgttacaagcaataaaccgcataaaaaatctgcccgtattgtaggggaagttttaggt
aaatatcatccacatggtgatgcatcagtatattttaccatggttcgtatggctcaggat
tggagtttgcgttatccaatggttgatggacaaggaaactttggtcacatcgatggtgat
tcgcctgcggcaatgcgttacacggaagcacgtttctctaaaattgcagaagaaatgctt
gccgatattaataaagatacggtagattttcagttaaatttcgatgataccttacaggag
ccgacagttttaccagcaaaaatccctaaccttttagtcaacggttcatcgggtattgcg
gtaggtatggcaactaatatggcgccacacaatttaacggaagtaattgatggcgttgtt
gcatatatagataatagcgaaattacgattgaggaattaatgaagtttgtaaaagctcct
gattttccaacaggcggaattatttatggttataccggtgtaaaagaagcgttcgaaacg
ggtcgcggtcggattgtaatgcgtgctaaagccgaaatcgaaatggttaaggagcgtgaa
gtaattatcgttacggaaattccttatcaagtaaacaaggccaacatggttgagcgtact
gctgaactggttaatgagaaaaaattagaaggaatttctaatatacgcgatgaatccaat
aaagatggtattcgtatcgtttacgagataaaacgtgatgcaaatgcttcaattgtatta
aataatctttacaaatacactgcgttacaaacttctttcagcgtaaataatattgcgctg
gtaaaaggtcgtccgcaaatgttaaatctaaaggatttaataacgcattttgtggatcac
agacatgatgttattgttcgtcgtaccaaatacgaattagctgaagccgaaaaacgtgct
cacattttagaaggttatttaattgctctagatcatttagatgaagtaattaaattaatt
cgtgcatcagaaacacctgaagaagcccgcctaggtttaattgagaatttctcattaagt
gatattcaggcacgtgccattttggatatgactttgcgtcgtttaactggacttgaacgc
gataagattaaagaagaatatgctgaattaatgaaaacgattgagcatttgaaattgatc
ttagcagatgaaggtttacgtatgcaaattattaaagatgaattagcagaaattcgttta
aaatatggcgatgaacgtagaacaaccattgttcattctgctgaggatatgagcatggaa
gattttattgccgatgaggaagttgtaatcacaatctctcacgaaggttatgtaaaacgt
actccagctacagattttagagcacagggaagaggtggaaaaggatctaaaggcagcaac
tcaagaaatgaagattttattgagcacatgcttatcgcatccaatcataattatatgttg
ttctttaccgaagcaggcagatgtttctggttaagggtatatgaaattcctgaaggttct
agaaccagtaaaggcagggcgattcagaatatcattaacataccaaaagaagagaaaatt
aaagcctatataaaggttaagaatcttaaggatcaagaatatttagagaataactttatc
ataatgtgtactaaaaaaggtaccattaagaaaacatctttagaagcgtattcccgtcct
cgtgttaatggtatcaacgcaattaatattaatgatggcgatgttttattggaagcttgt
ttaactaacggtgaaagtgagattgtaatggctttacgttcaggaagagctatacgtttt
aacgaaaaaacggttagaccaatgggtagaacagctactggagtgcgtggagtaagactt
gcgcatgataaagatgaggttgttggcatgattgctgtaaacaatcctgaggttacggtg
ttagtagtatcagaaaaaggttacggaaaacgtacagatattgatgattatcgtgttacc
aatagaggcggaaaaggtgtaaaaactttaaacgttactgaaaaaacaggtcagttagtt
tcaataaaagatgttacagatcttgaagatctgatgatcataaatcgttcgggtatcgta
attagaataccagtttcagcgttaagggttatgggacgtgcaactcaaggtgtacgttta
atatccttaaaaggagatgatgaaattgcatcggtaacaaaaattgatcacgaggaagat
gaggtagaagcagtagatttagaaggtgttttagtggttgatggtgaggaattggagcca
gcgactgaagatgaatctgcagaagctgatgaaaatgacgatgctgatcataatgataat
gaaacagaagaagaaaattaa
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